| Protein: | gi|42571109 |
| Organism: | Arabidopsis thaliana |
| Length: | 792 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571109.
| Description | E-value | Query Range |
Subject Range |
|
|
1101.0 | [0..20] | [792..20] |
|
|
1050.0 | [0..17] | [791..32] |
|
|
883.0 | [0..177] | [792..162] |
|
|
881.0 | [0..194] | [792..19] |
|
Region A: Residues: [1-195] |
1 11 21 31 41 51
| | | | | |
1 MAVSLPLFQF ILFLLLLLLS RTVYAYLIGV GSYDITGPAA DVNMMGYANS DQIASGIHFR 60
61 LRARAFIVAE PQGNRVVFVN LDACMASQIV TIKVLERLKA RYGELYTEKN VAISGIHTHA 120
121 GPGGYLQYVT YIVTSLGFVR QSFDVVVNGI EQSIVQAHES LRPGSAFVNK GDLLDAGVNR 180
181 SPSSYLNNPA AERSK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [196-375] |
1 11 21 31 41 51
| | | | | |
1 YKYDVDKEMT LVKFVDSQLG PTGSFNWFAT HGTSMSRTNS LISGDNKGAA ARFMEDWFEN 60
61 GQKNSVSSRN IPRRVSTIVS DFSRNRESYP FLELPNVAIL YIAVAERLMW KVMVLFYFVS 120
121 ESRLLDIAAT YKSSRGHSVD KSLDVKTRVR NGSKRKFVSA FCQSNCGDVS PNTLGTFCID 180
181
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [376-555] |
1 11 21 31 41 51
| | | | | |
1 TGLPCDFNHS TCNGQNELCY GRGPGYPDEF ESTRIIGEKQ FKMAVELFNK ATEKLQGKIG 60
61 YQHAYLDFSN LDVTVPKAGG GSETVKTCPA AMGFGFAAGT TDGPGAFDFK QGDDQGNVFW 120
121 RLVRNVLRTP GPEQVQCQKP KPILLDTGEM KEPYDWAPSI LPIQILRIGQ LVILSVPGEF 180
181
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [556-657] |
1 11 21 31 41 51
| | | | | |
1 TTMAGRRLRD AIKSFLISSD PKEFSNNMHV VIAGLTNTYS QYIATFEEYE VQRYEGASTL 60
61 YGRHTLTAYI QEFKKLATAL VNGLTLPRGP QPPDLLDKQI SL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.684 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.649 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.599 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.599 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.569 | a.8.4 | Description not found. |
| View | Download | 0.503 | d.354.1 | Description not found. |
| View | Download | 0.424 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.375 | a.118.14 | FliG |
| View | Download | 0.242 | d.253.1 | Description not found. |
| View | Download | 0.229 | d.76.2 | Description not found. |
| View | Download | 0.225 | d.110.4 | SNARE-like |
| View | Download | 0.220 | a.200.1 | Description not found. |
|
Region A: Residues: [658-792] |
1 11 21 31 41 51
| | | | | |
1 LSPVVVDSTP LGVKFGDVKA DVPPKSTFRR GQQVNATFWS GCPRNDLMTE GSFAVVETLR 60
61 EGGKWAPVYD DDDFSLKFKW SRPAKLSSES QATIEWRVPE SAVAGVYRIR HYGASKSLFG 120
121 SISSFSGSSS AFVVV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.857 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.574 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.549 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.527 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.527 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.526 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.384 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.330 | N/A | N/A | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.282 | N/A | N/A | b.29.1 | Concanavalin A-like lectins/glucanases |
| View | Download | 0.263 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.259 | N/A | N/A | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.223 | N/A | N/A | b.29.1 | Concanavalin A-like lectins/glucanases |
| View | Download | 0.217 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
| View | Download | 0.203 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
