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View Structure Prediction Details

Protein: IPCS3_ARATH
Organism: Arabidopsis thaliana
Length: 289 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPCS3_ARATH.

Description E-value Query
Range
Subject
Range
IPCS1_ARATH - Phosphatidylinositol:ceramide inositolphosphotransferase 1 OS=Arabidopsis thaliana GN=IPCS1 PE=2 SV=...
356.0 [0..1] [285..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVYVDREAP KLWRRIYSEA TLEASLLAEK WKLVLAGLVF QYIHGLAAHG VHYLHRPGPT  60
   61 LQDAGFFILP ALGQDKAFFS ETVFVTIFGS FILWTFHPFV SHS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [104-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKICTVLIWC RVFVYLAASQ SLRIITFFAT QLPGPNYHCR EGSKLAKIPP PKNVLEVLLI  60
   61 NFPD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [168-289]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVIYGCGDLI FSSHTIFTLV FVRTYQRYGT RRWIKHLAWL MAVIQSILII ASRKHYTVDI  60
   61 VVAWYTVNLV MFYVDSKLPE MAERSSGPSP TPLLPLSTKD SKNKSKEDHQ RLLNENNVAD 120
  121 DH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.58
Match: 1d2tA
Description: Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle