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View Structure Prediction Details

Protein: gi|42571009
Organism: Arabidopsis thaliana
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571009.

Description E-value Query
Range
Subject
Range
PARG2_ARATH - Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana GN=PARG2 PE=2 SV=1
780.0 [0..1] [532..1]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRADLRSI LQYLPLVAQS SSLVWPPSVE EELQTISRGP SESMVNSGEA LALHITNMRK  60
   61 SLSLNASDLA PYALQGYGLF FDKKISREES ANFFGEVVPA LCRLLLQLPS MLEKHYQKAD 120
  121 HVLDGVKSGL RLLGPQEAGI VLLSQELIAA LLACSFFCLF PEVDRSLKNL QGINFSGLFS 180
  181 FPYMRHCTKQ ENKIKCLIHY FGRICRWMPT GFVSFERKIL PLEYHPHFVS YPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADSWANSVTP LCSIEIHTSG AIEDQPCEAL EVDFADEYFG GLTLSYDTLQ EEIRFVINPE  60
   61 LIAGMIFLPR MDANEAIEIV GVERFSGYT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [323-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYGPSFQYAG DYTDNKDLDI FRRRKTRVIA IDAMPDPGMG QYKLDALIRE VNKAFSGYMH  60
   61 QCKYNIDVKH DPEASSSTKI KFVFAKQHVP LTSDSASQVI ESSHRWCIDH EEKKIGVATG 120
  121 NWGCGVFGGD PELKIMLQWL AISQSGRPFM SYYTFGLQAL QNLNQVIEMV ALQEMTVGDL 180
  181 WKKLVEYSSE RLSRRTWLGF FSWLMTSLST 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle