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View Structure Prediction Details

Protein: gi|42571009
Organism: Arabidopsis thaliana
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571009.

Description E-value Query
Range
Subject
Range
PARG2_ARATH - Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana GN=PARG2 PE=2 SV=1
780.0 [0..1] [532..1]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRADLRSI LQYLPLVAQS SSLVWPPSVE EELQTISRGP SESMVNSGEA LALHITNMRK  60
   61 SLSLNASDLA PYALQGYGLF FDKKISREES ANFFGEVVPA LCRLLLQLPS MLEKHYQKAD 120
  121 HVLDGVKSGL RLLGPQEAGI VLLSQELIAA LLACSFFCLF PEVDRSLKNL QGINFSGLFS 180
  181 FPYMRHCTKQ ENKIKCLIHY FGRICRWMPT GFVSFERKIL PLEYHPHFVS YPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADSWANSVTP LCSIEIHTSG AIEDQPCEAL EVDFADEYFG GLTLSYDTLQ EEIRFVINPE  60
   61 LIAGMIFLPR MDANEAIEIV GVERFSGYT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [323-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYGPSFQYAG DYTDNKDLDI FRRRKTRVIA IDAMPDPGMG QYKLDALIRE VNKAFSGYMH  60
   61 QCKYNIDVKH DPEASSSTKI KFVFAKQHVP LTSDSASQVI ESSHRWCIDH EEKKIGVATG 120
  121 NWGCGVFGGD PELKIMLQWL AISQSGRPFM SYYTFGLQAL QNLNQVIEMV ALQEMTVGDL 180
  181 WKKLVEYSSE RLSRRTWLGF FSWLMTSLST 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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