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View Structure Prediction Details

Protein: gi|30685073
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30685073.

Description E-value Query
Range
Subject
Range
ILVH2_ARATH - Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1
569.0 [0..1] [492..1]
gi|62734750, gi|... - gi|77549622|gb|ABA92419.1| acetolactate synthase small subunit, putative, expressed [Oryza sativa (j...
541.0 [0..14] [490..4]
ILVH_NICPL - Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1
447.0 [0..89] [467..31]
gi|116060322 - gi|116060322|emb|CAL55658.1| Acetolactate synthase, small subunit (ISS) [Ostreococcus tauri]
397.0 [0..20] [483..12]
gi|115398153, gi... - gi|115398153|ref|XP_001214668.1| acetolactate synthase small subunit, mitochondrial precursor [Asper...
258.0 [0..4] [263..9]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAISVSSSP SIRCLRSACS DSSPALVSST RVSFPAKISY LSGISSHRGD EMGKRMEGFV  60
   61 RSVDGKISDA SFSEASSATP KSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRKHTISVFV GDESGMINRI AGVFARRGYN IESLAVGLNR DKALFTIVVC GTERVLQQVI  60
   61 EQLQKLVNVL KVEDISSEPQ VERELMLVKV NAHPESRAEI MWLVDTFRAR VVDIAEHALT 120
  121 IEVTGDPGKM IAVERNLKKF QIREIVRTGK IALRREKMGA TAPFWRFSAA SYP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 2pc6A
Description: No description for 2pc6A was found.

Predicted Domain #3
Region A:
Residues: [257-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLKEQAPVSV LRSSKKGAIV PQKETSAGGD VYPVEPFFDP KVHRILDAHW GLLTDEDTSG  60
   61 LRSHTLSLLV NDIPGVLNIV TGVFARRGYN IQAYLAVGHA ETKGISRITT VIPATDESVS 120
  121 KLVQQLYKLV DVHEVHDLTH LPFSERELML IKIAVNAAAR RDVLDIASIF RAKAVDVSDH 180
  181 TITLQLTGDL DKMVALQRLL EPYGICEVAR TGRVALARES GVDSKYLRGY SFPLTG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.9
Match: 2pc6A
Description: No description for 2pc6A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle