| Protein: | gi|30685073 |
| Organism: | Arabidopsis thaliana |
| Length: | 492 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30685073.
| Description | E-value | Query Range |
Subject Range |
|
|
569.0 | [0..1] | [492..1] |
|
|
541.0 | [0..14] | [490..4] |
|
|
447.0 | [0..89] | [467..31] |
|
|
397.0 | [0..20] | [483..12] |
|
|
258.0 | [0..4] | [263..9] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MAAISVSSSP SIRCLRSACS DSSPALVSST RVSFPAKISY LSGISSHRGD EMGKRMEGFV 60
61 RSVDGKISDA SFSEASSATP KSK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.658 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.658 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.641 | a.118.8 | TPR-like |
| View | Download | 0.588 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.586 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.586 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.582 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.537 | a.77.1 | DEATH domain |
| View | Download | 0.502 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.501 | a.76.1 | Iron-dependent represor protein, dimerization domain |
|
Region A: Residues: [84-256] |
1 11 21 31 41 51
| | | | | |
1 VRKHTISVFV GDESGMINRI AGVFARRGYN IESLAVGLNR DKALFTIVVC GTERVLQQVI 60
61 EQLQKLVNVL KVEDISSEPQ VERELMLVKV NAHPESRAEI MWLVDTFRAR VVDIAEHALT 120
121 IEVTGDPGKM IAVERNLKKF QIREIVRTGK IALRREKMGA TAPFWRFSAA SYP
|
| Detection Method: | |
| Confidence: | 58.0 |
| Match: | 2pc6A |
| Description: | No description for 2pc6A was found. |
|
Region A: Residues: [257-492] |
1 11 21 31 41 51
| | | | | |
1 DLKEQAPVSV LRSSKKGAIV PQKETSAGGD VYPVEPFFDP KVHRILDAHW GLLTDEDTSG 60
61 LRSHTLSLLV NDIPGVLNIV TGVFARRGYN IQAYLAVGHA ETKGISRITT VIPATDESVS 120
121 KLVQQLYKLV DVHEVHDLTH LPFSERELML IKIAVNAAAR RDVLDIASIF RAKAVDVSDH 180
181 TITLQLTGDL DKMVALQRLL EPYGICEVAR TGRVALARES GVDSKYLRGY SFPLTG
|
| Detection Method: | |
| Confidence: | 5.9 |
| Match: | 2pc6A |
| Description: | No description for 2pc6A was found. |
