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View Structure Prediction Details

Protein: MCAC2_ARATH
Organism: Arabidopsis thaliana
Length: 416 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCAC2_ARATH.

Description E-value Query
Range
Subject
Range
gi|25370624 - gi|25370624|pir||D84556 hypothetical protein At2g17780 [imported] - Arabidopsis thaliana
297.0 [0..1] [416..1]
gi|113547484, gi... - gi|115450825|ref|NP_001049013.1| Os03g0157300 [Oryza sativa (japonica cultivar-group)], gi|113547484...
gi|218192120 - gi|218192120|gb|EEC74547.1| hypothetical protein OsI_10083 [Oryza sativa Indica Group]
296.0 [0..1] [415..1]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSWDQLGE IASVAQLTGI DALKLIGMIV NAANTARMHK KNCRQFAHHL KLIRNLLEQI  60
   61 KNSEMNQRSE ILEPLQGLDD ALRRSYILVK SCQEKSYLYL LAMGWNIVNQ FEKAQNEIDL 120
  121 FLKIVPLINM ADNARIRERL EAIERDQREY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.988 N/A N/A a.24.9 alpha-catenin/vinculin

Predicted Domain #2
Region A:
Residues: [151-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLDEEDRKVQ DVILKQESTR EAATSVLKKT LSRSYPNMGF CEALKTEEEK LQLELQRSRA  60
   61 RYDADQCEVI QRLIDVTQTA ATVEPNLEKV LTKKEELTSS KKRDDLYDTD SSSIRADSRS 120
  121 TSYVSSGHEL LSGRSLQHRG NWHADLLDCC SEPCLCLKTL FFPCGTLAKI STVATSRQIS 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.39794
Match: 2qkwB
Description: No description for 2qkwB was found.

Predicted Domain #3
Region A:
Residues: [331-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STEVCKNLIV YSLILSCCCY TCCIRKKLRK TLNITGGCID DFLSHLMCCC CALVQELREV  60
   61 EIHRASYGTE KSNKEMSPPT PQFMEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.816 N/A N/A f.15.1 Small-conductance potassium channel


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle