| Protein: | gi|10835871 |
| Organism: | Homo sapiens |
| Length: | 236 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10835871.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..1] | [236..363] |
|
|
226.0 | [0..1] | [236..231] |
|
|
226.0 | [0..1] | [236..297] |
|
|
224.0 | [0..1] | [236..214] |
|
|
224.0 | [0..1] | [236..229] |
|
Region A: Residues: [1-236] |
1 11 21 31 41 51
| | | | | |
1 ASPQLEELIT KVSKAHQETF PSLCQLGKYT TNSSADHRVQ LDLGLWDKFS ELATKCIIKI 60
61 VEFAKRLPGF TGLSIADQIT LLKAACLDIL MLRICTRYTP EQDTMTFSDG LTLNRTQMHN 120
121 AGFGPLTDLV FAFAGQLLPL EMDDTETGLL SAICLICGDR MDLEEPEKVD KLQEPLLEAL 180
181 RLYARRRRPS QPYMFPRMLM KITDLRGIST KGAERAITLK MEIPGPMPPL IREMLE
|
| Detection Method: |  |
| Confidence: | 49.522879 |
| Match: | 1xdkB |
| Description: | Crystal Structure of the RARbeta/RXRalpha Ligand Binding Domain Heterodimer in Complex with 9-cis Retinoic Acid and a Fragment of the TRAP220 Coactivator |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.15996699473685 | bayes_pls_golite062009 |
| transcription regulator activity | 0.46162010671465 | bayes_pls_golite062009 |
| protein binding | 0.33427459029264 | bayes_pls_golite062009 |
| nucleic acid binding | 0.15459949087509 | bayes_pls_golite062009 |
| DNA binding | 0.14395376162921 | bayes_pls_golite062009 |
