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View Structure Prediction Details

Protein: gi|4699575
Organism: Homo sapiens
Length: 123 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4699575.

Description E-value Query
Range		 Subject
Range
LYSC_ERYPA - Lysozyme C OS=Erythrocebus patas GN=LYZ PE=3 SV=1
LYSC_CHLAE - Lysozyme C OS=Chlorocebus aethiops GN=LYZ PE=2 SV=1
 189.0 [0..1] [122..19]
LYSC_MACMU - Lysozyme C OS=Macaca mulatta GN=LYZ PE=2 SV=1
 188.0 [0..1] [122..19]
LYSC_PAPAN - Lysozyme C OS=Papio anubis GN=LYZ PE=1 SV=1
LYSC_CERAT - Lysozyme C OS=Cercocebus atys GN=LYZ PE=2 SV=1
 188.0 [0..1] [122..19]
LYSC_ALLNI - Lysozyme C OS=Allenopithecus nigroviridis GN=LYZ PE=3 SV=1
 186.0 [0..1] [122..19]
LYSC_NASLA - Lysozyme C OS=Nasalis larvatus GN=LYZ PE=3 SV=1
 186.0 [0..1] [122..19]
LYSC_COLAN - Lysozyme C OS=Colobus angolensis GN=LYZ PE=3 SV=1
LYSC_COLGU - Lysozyme C OS=Colobus guereza GN=LYZ PE=2 SV=1
 185.0 [0..1] [122..19]
LYSC_TRAOB - Lysozyme C OS=Trachypithecus obscurus GN=LYZ PE=2 SV=1
LYSC_TRAFR - Lysozyme C OS=Trachypithecus francoisi GN=LYZ PE=2 SV=1
 185.0 [0..1] [122..19]
LYSC_MIOTA - Lysozyme C OS=Miopithecus talapoin GN=LYZ PE=3 SV=1
 185.0 [0..1] [122..19]
LYC_PREEN, LYSC_... - (P67977) Lysozyme C precursor (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase C), (P67977) Lysozyme C pre...
LYSC_SEMEN - Lysozyme C OS=Semnopithecus entellus GN=LYZ PE=1 SV=1
LYSC_TRAVT - Lysozyme C OS=Trachypithecus vetulus GN=LYZ PE=3 SV=1
 185.0 [0..1] [122..19]
LYSC_HYLLA - Lysozyme C OS=Hylobates lar GN=LYZ PE=2 SV=1
 185.0 [0..1] [122..19]

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Predicted Domain #1
Region A:
Residues: [1-123] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQFTKCELSQ LLKDIDGYGG IALPELICTM FHTSGYDTQA IVENDESTEY GLFQISNKLW  60
   61 CKSSQVPQSR NICDISCDKF LDDDITDDIM CAKKILDIKG IDYWLAHKAL CTEKLEQWLC 120
  121 EKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.0
Match: 1hmlA
Description: ALPHA_LACTALBUMIN POSSESSES A DISTINCT ZINC BINDING SITE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lysozyme activity 2.92895503832101 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.19773407498586 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.96160938846041 bayes_pls_golite062009
catalytic activity 1.5828442141425 bayes_pls_golite062009
penicillin binding 1.50909011505977 bayes_pls_golite062009
protein binding 1.08073077929654 bayes_pls_golite062009
drug binding 0.905681096612574 bayes_pls_golite062009
binding 0.887267359956298 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.129651578108655 bayes_pls_golite062009
polysaccharide binding 0.00563187712637614 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
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