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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: DEF1
Protein Desc: RNAPII degradation factor, forms a complex with Rad26p in chromatin, enables ubiquitination and prot...
Sequence Coverage: 34.6%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSTQFRKSNH NSHSSKKLNP ALKSKIDTLT ELFPDWTSDD LIDIVQEYDD LETIIDKITS  60
   61  GAVTRWDEVK KPAKKEKYEK KEQQHSYVPQ QHLPNPEDDI TYKSSNNSNS FTSTKHNSSN 120
  121  NYTQARNKKK VQTPRAHTTG KHVNLDKGKH VPSKPVSNTT SWAAAVSVDT KHDVPQDSND 180
  181  NNNEELEAQG QQAQEKNQEK EQEEQQQQEG HNNKEEHKQI EQPSLSSKKT TSRTSASQPK 240
  241  KMSWAAIATP KPKAVKKTES PLENVAELKK EISDIKKDDQ KSEASEEKVN EQETSAQEQE 300
  301  EETAEPSEEN EDRVPEVDGE EVQEEAEKKE QVKEEEQTAE ELEQEQDNVA APEEEVTVVE 360
  361  EKVEISAVIS EPPEDQANTV PQPQQQSQQP QQPQQPQQPQ QPQQPQQQQQ PQQPQQPQQQ 420
  421  LQQQQQQQQQ PVQAQAQAQE EQLSQNYYTQ QQQQQYAQQQ HQLQQQYLSQ QQQYAQQQQQ 480
  481  HPQPQSQQPQ SQQSPQSQKQ GNNVAAQQYY MYQNQFPGYS YPGMFDSQGY AYGQQYQQLA 540
  541  QNNAQTSGNA NQYNFQQGYG QAGANTAAAN LTSAAAAAAA SPATAHAQPQ QQQPYGGSFM 600
  601  PYYAHFYQQS FPYGQPQYGV AGQYPYQLPK NNYNYYQTQN GQEQQSPNQG VAQHSEDSQQ 660
  661  KQSQQQQQQQ PQGQPQPEVQ MQNGQPVNPQ QQMQFQQYYQ FQQQQQQAAA AAAAAAQQGV 720
  721  PYGYNGYDYN SKNSRGFY

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 5.9837 0.3585 4000.61 6599.7 1 24.2 37 K.SKIDTLTELFPDWTSDDLIDIVQEYDDLETIIDK.I
[No Spectrum] 5.2299 0.3928 3785.84 5167.2 1 29.0 3 K.IDTLTELFPDWTSDDLIDIVQEYDDLETIIDK.I
[No Spectrum] 4.2981 0.1938 3637.04 10547.1 1 21.0 1 F.PDWTSDDLIDIVQEYDDLETIIDKITSGAVTR.W
[No Spectrum] 2.7468 0.377 1077.46 4442.3 1 66.7 1 L.ETIIDKITSG.A
[No Spectrum] 5.6342 0.4025 2795.51 5448.8 1 36.4 1 K.KEQQHSYVPQQHLPNPEDDITYK.S
[No Spectrum] 1.8038 0.1658 1273.33 4980.8 29 40.9 1 K.SSNNSNSFTSTK.H
[No Spectrum] 2.5582 0.3914 1293.73 5170.9 4 55.0 1 K.HNSSNNYTQAR.N
[No Spectrum] 4.8948 0.4786 2283.5 3662.2 1 41.7 4 K.HVPSKPVSNTTSWAAAVSVDTK.H
[No Spectrum] 2.91 0.3541 2283.91 6718.6 1 50.0 7 K.HVPSKPVSNTTSWAAAVSVDTK.H
[No Spectrum] 6.2356 0.3126 2838.74 9998.4 1 41.7 1 K.HDVPQDSNDNNNEELEAQGQQAQEK.N
[No Spectrum] 2.8865 0.1426 1204.21 6360.1 2 75.0 1 K.KMSWAAIATPK.P
[No Spectrum] 2.7081 0.2593 1204.84 5631.7 1 60.0 1 K.KMSWAAIATPK.P
[No Spectrum] 4.5846 0.4244 1428.89 9086.7 1 91.7 12 K.KMSWAAIATPKPK.A
[No Spectrum] 3.1803 0.2482 1301.27 6504.5 1 72.7 3 K.MSWAAIATPKPK.A
[No Spectrum] 2.0553 0.1216 1301.86 4363.2 2 50.0 1 K.MSWAAIATPKPK.A
[No Spectrum] 3.5174 0.3387 1302.17 4102.9 1 50.0 1 K.MSWAAIATPKPK.A
[No Spectrum] 6.3147 0.5215 2907.47 10567.7 1 31.7 3 M.SWAAIATPKPKAVKKTESPLENVAELK.K
[No Spectrum] 4.3202 0.3274 1715.6 6258.6 1 50.0 1 V.KKTESPLENVAELKK.E
[No Spectrum] 2.5198 0.0372 1330.99 6130.9 7 68.2 1 K.TESPLENVAELK.K
[No Spectrum] 1.9739 0.0969 1228.48 3278.9 302 45.0 1 T.ESPLENVAELK.K
[No Spectrum] 2.8181 0.3109 1392.29 7347.2 1 68.2 1 S.EEKVNEQETSAQ.E
[No Spectrum] 4.6925 0.3137 3943.55 6597.7 1 25.0 2 K.KEQVKEEEQTAEELEQEQDNVAAPEEEVTVVEEK.V
[No Spectrum] 5.9664 0.4011 3816.98 8146.8 1 25.8 4 K.EQVKEEEQTAEELEQEQDNVAAPEEEVTVVEEK.V
[No Spectrum] 2.872 0.2139 1801.39 3994.4 1 53.3 1 A.HAQPQQQQPYGGSFMP.Y
[No Spectrum] 4.6971 0.4148 3328.04 8928.1 1 33.3 1 Y.YAHFYQQSFPYGQPQYGVAGQYPYQLPK.N
[No Spectrum] 2.3938 0.3235 1313.32 5420.5 1 59.1 1 Q.SFPYGQPQYGVA.G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle