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View MS Result Peptides

Run Information:

Bait Protein: RPA135
Hit Protein: RPC40
Protein Desc: RNA polymerase subunit AC40, common to RNA polymerase I and III
Sequence Coverage: 94.0%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MSNIVGIEYN RVTNTTSTDF PGFSKDAENE WNVEKFKKDF EVNISSLDAR EANFDLINID  60
   61  TSIANAFRRI MISEVPSVAA EYVYFFNNTS VIQDEVLAHR IGLVPLKVDP DMLTWVDSNL 120
  121  PDDEKFTDEN TIVLSLNVKC TRNPDAPKGS TDPKELYNNA HVYARDLKFE PQGRQSTTFA 180
  181  DCPVVPADPD ILLAKLRPGQ EISLKAHCIL GIGGDHAKFS PVSTASYRLL PQINILQPIK 240
  241  GESARRFQKC FPPGVIGIDE GSDEAYVKDA RKDTVSREVL RYEEFADKVK LGRVRNHFIF 300
  301  NVESAGAMTP EEIFFKSVRI LKNKAEYLKN CPITQ

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 3.8734 0.2844 3766.28 7591.9 1 27.4 1 N.RVTNTTSTDFPGFSKDAENEWNVEKFKKDFEV.N
[No Spectrum] 4.454 0.3396 4080.35 7033.5 1 23.5 1 N.RVTNTTSTDFPGFSKDAENEWNVEKFKKDFEVNIS.S
[No Spectrum] 4.2803 0.4443 1503.53 7499.5 1 76.9 1 R.VTNTTSTDFPGFSK.D
[No Spectrum] 4.5133 0.3102 3827.84 6261.8 1 20.3 1 V.TNTTSTDFPGFSKDAENEWNVEKFKKDFEVNIS.S
[No Spectrum] 3.0185 0.3242 2173.41 6227.8 1 41.7 1 T.TSTDFPGFSKDAENEWNVE.K
[No Spectrum] 3.7273 0.3062 2073.11 6011.8 1 50.0 1 T.STDFPGFSKDAENEWNVE.K
[No Spectrum] 3.6 0.1612 3407.96 5543.0 4 21.4 1 T.STDFPGFSKDAENEWNVEKFKKDFEVNIS.S
[No Spectrum] 3.3622 0.3281 1986.33 5726.9 1 50.0 1 S.TDFPGFSKDAENEWNVE.K
[No Spectrum] 2.9127 0.2049 1154.79 5330.1 34 68.8 1 E.KFKKDFEVN.I
[No Spectrum] 3.6318 0.3075 1494.61 5977.0 1 83.3 1 K.KDFEVNISSLDAR.E
[No Spectrum] 3.5939 0.2979 1367.65 3191.1 1 68.2 22 K.DFEVNISSLDAR.E
[No Spectrum] 5.1324 0.3098 1369.39 6818.8 1 86.4 58 K.DFEVNISSLDAR.E
[No Spectrum] 4.2445 0.4497 2182.75 7320.8 1 47.2 2 A.REANFDLINIDTSIANAFR.R
[No Spectrum] 4.3695 0.3046 2025.17 6483.3 1 44.1 6 R.EANFDLINIDTSIANAFR.R
[No Spectrum] 6.2979 0.4363 2027.69 7556.0 1 76.5 359 R.EANFDLINIDTSIANAFR.R
[No Spectrum] 1.9949 0.2298 1151.71 7354.4 14 50.0 1 A.NFDLINIDTS.I
[No Spectrum] 2.6498 0.1686 1335.46 4525.2 19 54.5 6 A.NFDLINIDTSIA.N
[No Spectrum] 2.9086 0.2757 1335.91 7146.2 16 63.6 2 A.NFDLINIDTSIA.N
[No Spectrum] 4.5037 0.4403 3543.62 3669.4 1 27.5 49 R.IMISEVPSVAAEYVYFFNNTSVIQDEVLAHR.I
[No Spectrum] 3.9053 0.4987 2587.95 9376.4 1 47.6 6 V.AAEYVYFFNNTSVIQDEVLAHR.I
[No Spectrum] 1.9232 0.1156 939.25 3322.2 9 66.7 1 A.AEYVYFF.N
[No Spectrum] 3.3158 0.1651 1763.13 7012.3 1 53.6 4 V.YFFNNTSVIQDEVLA.H
[No Spectrum] 3.5027 0.3674 2053.04 3777.6 1 45.3 1 V.YFFNNTSVIQDEVLAHR.I
[No Spectrum] 5.1986 0.4043 2056.01 8908.4 1 71.9 4 V.YFFNNTSVIQDEVLAHR.I
[No Spectrum] 4.6782 0.5235 1889.25 8066.5 1 66.7 44 Y.FFNNTSVIQDEVLAHR.I
[No Spectrum] 3.9912 0.3966 1745.65 7323.9 1 60.7 3 F.FNNTSVIQDEVLAHR.I
[No Spectrum] 2.7456 0.3288 1598.49 9776.6 1 53.8 1 F.NNTSVIQDEVLAHR.I
[No Spectrum] 3.1499 0.3277 1267.15 6926.5 1 80.0 1 T.SVIQDEVLAHR.I
[No Spectrum] 2.8503 0.2332 1862.71 5155.3 1 46.9 1 T.SVIQDEVLAHRIGLVPL.K
[No Spectrum] 2.8625 0.2753 1589.79 7154.9 1 65.4 2 A.HRIGLVPLKVDPDM.L
[No Spectrum] 2.8619 0.2733 1453.45 5130.7 1 62.5 1 H.RIGLVPLKVDPDM.L
[No Spectrum] 2.2911 0.0435 740.51 2854.4 4 75.0 3 R.IGLVPLK.V
[No Spectrum] 4.686 0.3488 2813.72 4832.1 1 33.3 1 R.IGLVPLKVDPDMLTWVDSNLPDDEK.F
[No Spectrum] 4.1447 0.2414 3137.33 7763.9 1 29.8 1 L.KVDPDMLTWVDSNLPDDEKFTDENTIV.L
[No Spectrum] 3.6113 0.3137 2090.79 7635.5 1 55.9 2 K.VDPDMLTWVDSNLPDDEK.F
[No Spectrum] 7.0801 0.5586 3662.36 8570.6 1 31.5 181 K.VDPDMLTWVDSNLPDDEKFTDENTIVLSLNVK.C
[No Spectrum] 3.751 0.3247 2338.85 6868.7 1 39.5 1 L.TWVDSNLPDDEKFTDENTIV.L
[No Spectrum] 3.5563 0.2074 2452.45 7602.4 1 45.0 3 L.TWVDSNLPDDEKFTDENTIVL.S
[No Spectrum] 3.4495 0.1787 2165.39 6250.1 1 47.2 1 W.VDSNLPDDEKFTDENTIVL.S
[No Spectrum] 3.6314 0.2133 1953.85 6573.1 1 53.1 3 D.SNLPDDEKFTDENTIVL.S
[No Spectrum] 5.4608 0.441 1594.33 8683.7 1 80.8 64 K.FTDENTIVLSLNVK.C
[No Spectrum] 3.6294 0.3215 2016.2 6638.5 1 39.7 1 T.RNPDAPKGSTDPKELYNN.A
[No Spectrum] 3.0758 0.3377 2089.29 5528.2 1 41.7 1 T.RNPDAPKGSTDPKELYNNA.H
[No Spectrum] 1.8027 0.0895 642.51 3060.0 3 80.0 1 R.NPDAPK.G
[No Spectrum] 3.6675 0.4134 1350.81 3745.0 1 65.0 2 K.ELYNNAHVYAR.D
[No Spectrum] 3.9183 0.4944 2048.37 4123.3 1 63.9 1 Q.GRQSTTFADCPVVPADPDI.L
[No Spectrum] 3.2039 0.3373 2159.51 3767.6 1 52.6 1 Q.GRQSTTFADCPVVPADPDIL.L
[No Spectrum] 2.9679 0.2513 2344.83 5493.1 2 33.3 1 Q.GRQSTTFADCPVVPADPDILLA.K
[No Spectrum] 4.5675 0.5312 2258.63 4371.5 1 52.5 5 R.QSTTFADCPVVPADPDILLAK.L
[No Spectrum] 3.2284 0.3122 1383.52 4698.6 1 62.5 9 F.ADCPVVPADPDIL.L
[No Spectrum] 3.2579 0.2395 1340.39 7623.7 3 72.7 1 A.KLRPGQEISLKA.H
[No Spectrum] 2.6799 0.2493 1141.39 6791.8 2 72.2 2 K.LRPGQEISLK.A
[No Spectrum] 3.8621 0.4541 1350.59 8430.5 1 83.3 4 K.AHCILGIGGDHAK.F
[No Spectrum] 4.3945 0.4749 1780.37 9194.3 1 68.8 5 K.AHCILGIGGDHAKFSPV.S
[No Spectrum] 3.4701 0.4726 1149.5 5714.8 1 70.0 2 A.HCILGIGGDHA.K
[No Spectrum] 3.1383 0.4581 1150.23 7467.0 1 80.0 1 A.HCILGIGGDHA.K
[No Spectrum] 5.1299 0.5401 1708.33 7745.8 1 70.0 39 A.HCILGIGGDHAKFSPV.S
[No Spectrum] 4.1544 0.4165 1708.79 7466.4 1 46.7 4 A.HCILGIGGDHAKFSPV.S
[No Spectrum] 5.33 0.5226 1795.57 7396.4 1 75.0 15 A.HCILGIGGDHAKFSPVS.T
[No Spectrum] 5.363 0.5759 1896.97 9830.4 1 70.6 59 A.HCILGIGGDHAKFSPVST.A
[No Spectrum] 5.1375 0.4398 1967.51 4809.0 1 66.7 19 A.HCILGIGGDHAKFSPVSTA.S
[No Spectrum] 2.5713 0.2351 1013.05 4840.6 1 94.4 1 H.CILGIGGDHA.K
[No Spectrum] 3.0272 0.3779 1572.83 7556.8 1 64.3 1 H.CILGIGGDHAKFSPV.S
[No Spectrum] 2.9429 0.312 1760.47 6982.8 1 56.2 1 H.CILGIGGDHAKFSPVST.A
[No Spectrum] 3.0473 0.1858 1833.37 7394.6 2 41.2 1 H.CILGIGGDHAKFSPVSTA.S
[No Spectrum] 2.9335 0.3097 1185.29 5690.0 1 72.7 1 L.GIGGDHAKFSPV.S
[No Spectrum] 2.618 0.3515 1114.49 3022.8 1 66.7 1 K.FSPVSTASYR.L
[No Spectrum] 3.6146 0.2899 2211.97 5488.1 1 42.1 1 T.ASYRLLPQINILQPIKGESA.R
[No Spectrum] 3.5399 0.2406 1670.57 4323.0 1 69.2 26 A.SYRLLPQINILQPI.K
[No Spectrum] 3.4875 0.4052 1982.95 4709.5 1 53.1 1 A.SYRLLPQINILQPIKGE.S
[No Spectrum] 4.72 0.303 2142.02 5176.9 1 44.4 2 A.SYRLLPQINILQPIKGESA.R
[No Spectrum] 4.2408 0.349 2142.07 5239.9 1 61.1 7 A.SYRLLPQINILQPIKGESA.R
[No Spectrum] 4.36 0.4554 2294.87 9561.7 1 60.5 1 A.SYRLLPQINILQPIKGESAR.R
[No Spectrum] 5.2672 0.183 2297.39 6979.1 2 44.7 1 A.SYRLLPQINILQPIKGESAR.R
[No Spectrum] 3.5657 0.3298 1548.65 4557.3 1 66.7 4 Y.RLLPQINILQPIK.G
[No Spectrum] 5.4527 0.4766 2047.93 6960.0 1 61.8 2 Y.RLLPQINILQPIKGESAR.R
[No Spectrum] 5.3243 0.3843 2048.84 6286.2 1 47.1 1 Y.RLLPQINILQPIKGESAR.R
[No Spectrum] 3.2942 0.1693 1261.89 5169.2 4 70.0 1 R.LLPQINILQPI.K
[No Spectrum] 3.3298 0.23 1389.34 8524.1 1 68.2 11 R.LLPQINILQPIK.G
[No Spectrum] 3.4338 0.1714 1391.15 2878.3 5 81.8 23 R.LLPQINILQPIK.G
[No Spectrum] 5.2238 0.4245 1892.65 4181.5 1 71.9 95 R.LLPQINILQPIKGESAR.R
[No Spectrum] 3.5183 0.1601 1164.95 7469.5 6 72.2 17 L.PQINILQPIK.G
[No Spectrum] 4.9199 0.3981 1663.83 6490.5 1 67.9 4 L.PQINILQPIKGESAR.R
[No Spectrum] 2.6471 0.1932 1124.85 6591.4 1 72.2 1 Q.INILQPIKGE.S
[No Spectrum] 3.6781 0.182 1127.15 7144.7 2 83.3 1 Q.INILQPIKGE.S
[No Spectrum] 2.684 0.1113 1439.57 6571.8 14 58.3 1 Q.INILQPIKGESAR.R
[No Spectrum] 2.8283 0.1856 1328.25 5130.8 1 59.1 3 I.NILQPIKGESAR.R
[No Spectrum] 4.6242 0.4876 3243.17 8047.7 1 29.5 4 I.KGESARRFQKCFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 4.0631 0.2631 3430.31 5977.5 4 21.7 1 I.KGESARRFQKCFPPGVIGIDEGSDEAYVKDA.R
[No Spectrum] 4.5118 0.4313 2931.11 6704.0 1 33.0 9 E.SARRFQKCFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 4.5501 0.3996 2770.31 6337.1 1 31.5 5 A.RRFQKCFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 4.8986 0.4223 2613.65 8260.4 1 52.3 1 R.RFQKCFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 2.7547 0.3079 1848.59 8461.1 2 40.6 1 F.QKCFPPGVIGIDEGSDE.A
[No Spectrum] 3.6436 0.3725 2084.15 7756.7 8 41.7 5 F.QKCFPPGVIGIDEGSDEAY.V
[No Spectrum] 5.8933 0.4842 2307.95 8317.4 1 42.5 10 F.QKCFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 3.9036 0.4496 2309.51 8997.7 1 45.0 12 F.QKCFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 4.547 0.5447 2181.99 8770.6 1 57.9 1 Q.KCFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 4.9593 0.5562 2054.31 3554.0 1 75.0 64 K.CFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 5.8214 0.4369 2056.88 5297.9 1 48.6 6 K.CFPPGVIGIDEGSDEAYVK.D
[No Spectrum] 3.2181 0.3823 2395.15 5861.2 1 45.2 2 K.CFPPGVIGIDEGSDEAYVKDAR.K
[No Spectrum] 4.3627 0.4753 1745.83 10586.5 1 59.4 8 F.PPGVIGIDEGSDEAYVK.D
[No Spectrum] 1.865 0.1307 1283.22 8390.0 4 50.0 1 I.GIDEGSDEAYVK.D
[No Spectrum] 2.3716 0.291 1112.65 5606.4 1 61.1 3 I.DEGSDEAYVK.D
[No Spectrum] 2.8925 0.1891 1544.89 4235.9 17 54.2 1 K.DARKDTVSREVLR.Y
[No Spectrum] 3.5007 0.2624 2638.76 5281.7 2 31.0 1 R.KDTVSREVLRYEEFADKVKLGR.V
[No Spectrum] 2.845 0.3632 1398.53 3714.7 1 60.0 1 R.EVLRYEEFADK.V
[No Spectrum] 3.2369 0.2917 1399.03 8077.4 1 80.0 2 R.EVLRYEEFADK.V
[No Spectrum] 3.6353 0.2298 1497.87 6379.3 1 86.4 5 R.EVLRYEEFADKV.K
[No Spectrum] 2.9185 0.1479 1628.59 4327.5 20 50.0 1 R.EVLRYEEFADKVK.L
[No Spectrum] 3.9252 0.3599 2208.86 6704.9 1 39.7 1 R.EVLRYEEFADKVKLGRVR.N
[No Spectrum] 2.5303 0.3306 901.42 5734.2 5 83.3 2 R.YEEFADK.V
[No Spectrum] 3.0525 0.3522 1001.23 4802.5 1 85.7 2 R.YEEFADKV.K
[No Spectrum] 2.7841 0.2114 1128.71 6212.0 1 75.0 2 R.YEEFADKVK.L
[No Spectrum] 3.9613 0.4714 1454.81 7108.7 1 86.4 1 R.YEEFADKVKLGR.V
[No Spectrum] 2.5364 0.085 1275.17 4098.4 1 77.8 1 R.VRNHFIFNVE.S
[No Spectrum] 5.143 0.393 2429.6 8321.1 1 40.0 72 R.NHFIFNVESAGAMTPEEIFFK.S
[No Spectrum] 6.8417 0.4469 2431.59 9940.9 1 67.5 143 R.NHFIFNVESAGAMTPEEIFFK.S
[No Spectrum] 4.8036 0.4716 2769.8 6009.8 1 31.5 1 R.NHFIFNVESAGAMTPEEIFFKSVR.I
[No Spectrum] 2.8478 0.2884 2030.61 5799.8 12 38.2 1 F.IFNVESAGAMTPEEIFFK.S
[No Spectrum] 3.5339 0.4663 1427.79 5552.4 1 75.0 1 E.SAGAMTPEEIFFK.S
[No Spectrum] 2.7958 0.2755 1269.5 8650.8 1 75.0 3 A.GAMTPEEIFFK.S
[No Spectrum] 3.2015 0.2779 1270.73 4904.0 13 65.0 1 A.GAMTPEEIFFK.S
[No Spectrum] 2.9578 0.2378 1011.37 5416.8 2 92.9 1 M.TPEEIFFK.S
[No Spectrum] 2.3652 0.062 1011.67 4680.1 5 78.6 2 M.TPEEIFFK.S
[No Spectrum] 1.9441 0.0458 909.48 4730.8 7 75.0 1 T.PEEIFFK.S
[No Spectrum] 1.8076 0.0238 683.48 2540.2 14 75.0 1 E.EIFFK.S
[No Spectrum] 4.2792 0.2977 2047.34 6857.4 1 42.2 1 K.SVRILKNKAEYLKNCPI.T
[No Spectrum] 4.0536 0.2525 2150.36 4320.8 2 35.3 1 K.SVRILKNKAEYLKNCPIT.Q
[No Spectrum] 3.0932 0.2537 1219.65 7888.6 2 66.7 1 R.ILKNKAEYLK.N
[No Spectrum] 2.9907 0.146 994.23 3701.4 1 85.7 1 L.KNKAEYLK.N
[No Spectrum] 3.9372 0.2046 1578.57 5939.1 1 70.8 1 L.KNKAEYLKNCPIT.Q
[No Spectrum] 2.5545 0.0012 865.42 4030.5 24 83.3 1 K.NKAEYLK.N
[No Spectrum] 2.5385 0.011 1349.67 6835.4 44 55.0 1 K.NKAEYLKNCPI.T
[No Spectrum] 3.4472 0.2864 1451.39 7994.4 1 63.6 1 K.NKAEYLKNCPIT.Q
[No Spectrum] 4.4238 0.3525 1579.39 9233.5 1 79.2 3 K.NKAEYLKNCPITQ.-
[No Spectrum] 2.5888 0.2043 1337.73 6785.5 1 65.0 1 K.AEYLKNCPITQ.-
[No Spectrum] 2.1264 0.0129 860.5 5346.0 166 66.7 1 L.KNCPITQ.-
[No Spectrum] 2.0347 0.1365 732.48 3220.3 12 70.0 4 K.NCPITQ.-

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle