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View MS Result Peptides

Run Information:

Bait Protein: MLP2
Hit Protein: NMD2
Protein Desc: Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; interacts with Nam7p and Upf3p; ...
Sequence Coverage: 7.4%
Organism: Saccharomyces cerevisiae
MS Run: View Run


Sequence Coverage:

Hit Protein
Sequence:
[NCBI BLAST]
[ProtParam]
       1          11         21         31         41         51         
       |          |          |          |          |          |          
    1  MDDGRKKELH DLNTRAWNGE EVFPLKSKKL DSSIKRNTGF IKKLKKGFVK GSESSLLKDL  60
   61  SEASLEKYLS EIIVTVTECL LNVLNKNDDV IAAVEIISGL HQRFNGRFTS PLLGAFLQAF 120
  121  ENPSVDIESE RDELQRITRV KGNLRVFTEL YLVGVFRTLD DIESKDAIPN FLQKKTGRKD 180
  181  PLLFSILREI LNYKFKLGFT TTIATAFIKK FAPLFRDDDN SWDDLIYDSK LKGALQSLFK 240
  241  NFIDATFARA TELHKKVNKL QREHQKCQIR TGKLRDEYVE EYDKLLPIFI RFKTSAITLG 300
  301  EFFKLEIPEL EGASNDDLKE TASPMITNQI LPPNQRLWEN EDTRKFYEIL PDISKTVEES 360
  361  QSSKTEKDSN VNSKNINLFF TDLEMADCKD IIDDLSNRYW SSYLDNKATR NRILKFFMET 420
  421  QDWSKLPVYS RFIATNSKYM PEIVSEFINY LDNGFRSQLH SNKINVKNII FFSEMIKFQL 480
  481  IPSFMIFHKI RTLIMYMQVP NNVEILTVLL EHSGKFLLNK PEYKELMEKM VQLIKDKKND 540
  541  RQLNMNMKSA LENIITLLYP PSVKSLNVTV KTITPEQQFY RILIRSELSS LDFKHIVKLV 600
  601  RKAHWDDVAI QKVLFSLFSK PHKISYQNIP LLTKVLGGLY SYRRDFVIRC IDQVLENIER 660
  661  GLEINDYGQN MHRISNVRYL TEIFNFEMIK SDVLLDTIYH IIRFGHINNQ PNPFYLNYSD 720
  721  PPDNYFRIQL VTTILLNINR TPAAFTKKCK LLLRFFEYYT FIKEQPLPKE TEFRVSSTFK 780
  781  KYENIFGNTK FERSENLVES ASRLESLLKS LNAIKSKDDR VKGSSASIHN GKESAVPIES 840
  841  ITEDDEDEDD ENDDGVDLLG EDEDAEISTP NTESAPGKHQ AKQDESEDED DEDDDEDDDD 900
  901  DDDDDDDDGE EGDEDDDEDD DDEDDDDEEE EDSDSDLEYG GDLDADRDIE MKRMYEEYER 960
  961  KLKDEEERKA EEELERQFQK MMQESIDARK SEKVVASKIP VISKPVSVQK PLLLKKSEEP1020
 1021  SSSKETYEEL SKPKKIAFTF LTKSGKKTQS RILQLPTDVK FVSDVLEEEE KLKTERNKIK1080
 1081  KIVLKRSFD

Run Result Peptides:

XCorr Delta CN M+H+ Total
Intensity
Sp
Rank
Ion
Prop.
Red. Sequence
[No Spectrum] 2.9392 0.0895 2851.4565 4513.8 3 27.3 1 K.LRDEYVEEYDKLLPIFIRFKTSA.I
[No Spectrum] 2.1135 0.051 1330.0521 6066.0 52 54.5 1 R.LESLLKSLNAIK.S
[No Spectrum] 1.6746 0.1118 1688.3922 4809.4 1 39.3 1 E.SLLKSLNAIKSKDDR.V
[No Spectrum] 3.1334 0.1419 4420.2964 6428.1 8 15.4 1 P.IESITEDDEDEDDENDDGVDLLGEDEDAEISTPNTESAPGK.H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle