| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.714331892453] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| FLO1 |
|
|
|
| FLO9 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| fungal-type cell wall | 2.7588E-4 | 2 | 105 | 2 | 6292 |
| cell wall | 2.8118E-4 | 2 | 106 | 2 | 6292 |
| external encapsulating structure | 2.8118E-4 | 2 | 106 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| flocculation via cell wall protein-carbohydrate interaction | 2.2737E-6 | 2 | 10 | 2 | 6292 |
| flocculation | 2.779E-6 | 2 | 11 | 2 | 6292 |
| multi-organism process | 5.13E-4 | 2 | 143 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| mannose binding | 3.0316E-7 | 2 | 4 | 2 | 6292 |
| monosaccharide binding | 7.579E-7 | 2 | 6 | 2 | 6292 |
| sugar binding | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| carbohydrate binding | 1.4147E-6 | 2 | 8 | 2 | 6292 |