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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.715999086731]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular bud neck 4.1715E-4 2 129 2 6292
cellular bud 6.9196E-4 2 166 2 6292
site of polarized growth 7.0879E-4 2 168 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

regulation of exit from mitosis 1.5158E-5 2 25 2 6292
exit from mitosis 1.5158E-5 2 25 2 6292
regulation of mitotic cell cycle 1.2556E-4 2 71 2 6292
regulation of cell cycle process 1.6371E-4 2 81 2 6292
protein amino acid phosphorylation 2.6542E-4 2 103 2 6292
M phase of mitotic cell cycle 4.1068E-4 2 128 2 6292
regulation of cell cycle 4.3024E-4 2 131 2 6292
phosphorylation 8.0494E-4 2 179 2 6292
phosphorus metabolic process 1.3191E-3 2 229 2 6292
phosphate metabolic process 1.3191E-3 2 229 2 6292
mitotic cell cycle 1.6363E-3 2 255 2 6292
M phase 2.1762E-3 2 294 2 6292
cell morphogenesis during vegetative growth 2.859E-3 2 9 1 6292
post-translational protein modification 3.2108E-3 2 357 2 6292
cell cycle phase 3.5621E-3 2 376 2 6292
cell cycle process 6.0534E-3 2 490 2 6292
protein modification process 6.278E-3 2 499 2 6292
cell cycle 6.95E-3 2 525 2 6292
macromolecule modification 8.1649E-3 2 569 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

kinase regulator activity 5.9419E-5 2 49 2 6292
enzyme regulator activity 1.0773E-3 2 207 2 6292
protein kinase activator activity 2.859E-3 2 9 1 6292
kinase activator activity 3.1764E-3 2 10 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle