From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.715999086731] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
MOB1 |
|
|
|
MOB2 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
regulation of exit from mitosis | 1.5158E-5 | 2 | 25 | 2 | 6292 |
exit from mitosis | 1.5158E-5 | 2 | 25 | 2 | 6292 |
regulation of mitotic cell cycle | 1.2556E-4 | 2 | 71 | 2 | 6292 |
regulation of cell cycle process | 1.6371E-4 | 2 | 81 | 2 | 6292 |
protein amino acid phosphorylation | 2.6542E-4 | 2 | 103 | 2 | 6292 |
M phase of mitotic cell cycle | 4.1068E-4 | 2 | 128 | 2 | 6292 |
regulation of cell cycle | 4.3024E-4 | 2 | 131 | 2 | 6292 |
phosphorylation | 8.0494E-4 | 2 | 179 | 2 | 6292 |
phosphorus metabolic process | 1.3191E-3 | 2 | 229 | 2 | 6292 |
phosphate metabolic process | 1.3191E-3 | 2 | 229 | 2 | 6292 |
mitotic cell cycle | 1.6363E-3 | 2 | 255 | 2 | 6292 |
M phase | 2.1762E-3 | 2 | 294 | 2 | 6292 |
cell morphogenesis during vegetative growth | 2.859E-3 | 2 | 9 | 1 | 6292 |
post-translational protein modification | 3.2108E-3 | 2 | 357 | 2 | 6292 |
cell cycle phase | 3.5621E-3 | 2 | 376 | 2 | 6292 |
cell cycle process | 6.0534E-3 | 2 | 490 | 2 | 6292 |
protein modification process | 6.278E-3 | 2 | 499 | 2 | 6292 |
cell cycle | 6.95E-3 | 2 | 525 | 2 | 6292 |
macromolecule modification | 8.1649E-3 | 2 | 569 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
kinase regulator activity | 5.9419E-5 | 2 | 49 | 2 | 6292 |
enzyme regulator activity | 1.0773E-3 | 2 | 207 | 2 | 6292 |
protein kinase activator activity | 2.859E-3 | 2 | 9 | 1 | 6292 |
kinase activator activity | 3.1764E-3 | 2 | 10 | 1 | 6292 |