| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 0.868724172237] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lipid particle | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| microsome | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| vesicular fraction | 6.3477E-3 | 2 | 20 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| lipid transport | 3.3651E-5 | 2 | 37 | 2 | 6292 |
| lipid localization | 3.744E-5 | 2 | 39 | 2 | 6292 |
| very long-chain fatty acid metabolic process | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| lipid metabolic process | 1.4491E-3 | 2 | 240 | 2 | 6292 |
| protein myristoylation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| protein amino acid myristoylation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| N-terminal protein lipidation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| N-terminal protein myristoylation | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| macromolecule localization | 3.9717E-3 | 2 | 397 | 2 | 6292 |
| peptide or protein amino-terminal blocking | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| N-terminal protein amino acid modification | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| peptidyl-amino acid modification | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| long-chain fatty acid-CoA ligase activity | 7.579E-7 | 2 | 6 | 2 | 6292 |
| fatty acid ligase activity | 7.579E-7 | 2 | 6 | 2 | 6292 |
| ligase activity, forming carbon-sulfur bonds | 2.2737E-6 | 2 | 10 | 2 | 6292 |
| ligase activity | 5.6464E-4 | 2 | 150 | 2 | 6292 |
| fatty acid transporter activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| long-chain fatty acid transporter activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| lipid transporter activity | 6.0308E-3 | 2 | 19 | 1 | 6292 |