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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.02] [SVM Score: 1.26832957826]
Complex Size: 2 proteins

Complex Member Proteins

Protein

 GO Cellular Component GO Biological Process GO Molecular Function
MAK3
  • NatC complex
    		•
  • telomere maintenance
  • N-terminal protein amino acid acetylation
    		•
  • peptide alpha-N-acetyltransferase activity
    		•
    NAT1
  • NatA complex
  • mitochondrion
    		•
  • N-terminal protein amino acid acetylation
    		•
  • peptide alpha-N-acetyltransferase activity
    		•

    Cellular Component Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    protein acetyltransferase complex 1.819E-6 2 9 2 6292
    N-terminal protein acetyltransferase complex 1.819E-6 2 9 2 6292
    NatC complex 9.5344E-4 2 3 1 6292
    NatA complex 9.5344E-4 2 3 1 6292

    Biological Process Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    N-terminal protein amino acid acetylation 2.2737E-6 2 10 2 6292
    peptide or protein amino-terminal blocking 5.3053E-6 2 15 2 6292
    N-terminal protein amino acid modification 5.3053E-6 2 15 2 6292
    peptidyl-amino acid modification 1.7735E-5 2 27 2 6292
    protein amino acid acetylation 5.2295E-5 2 46 2 6292
    protein amino acid acylation 8.6451E-5 2 59 2 6292
    protein modification process 6.278E-3 2 499 2 6292
    macromolecule modification 8.1649E-3 2 569 2 6292

    Molecular Function Analysis

    Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

    Only showing terms with a p-value less than or equal to 0.01.

    GO Term

    		 P-value

    		 A

    		 B

    		 I

    		 T
    peptide N-acetyltransferase activity 2.2737E-6 2 10 2 6292
    peptide alpha-N-acetyltransferase activity 2.2737E-6 2 10 2 6292
    N-acetyltransferase activity 2.6678E-5 2 33 2 6292
    N-acyltransferase activity 3.552E-5 2 38 2 6292
    acetyltransferase activity 6.1895E-5 2 50 2 6292
    transferase activity, transferring acyl groups other than amino-acyl groups 2.1151E-4 2 92 2 6292
    acyltransferase activity 2.1151E-4 2 92 2 6292
    transferase activity, transferring acyl groups 2.8654E-4 2 107 2 6292
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle