| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.896446124962] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| SPC24 |
|
|
|
| SPC29 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| Ndc80 complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| central plaque of spindle pole body | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| microtubule organizing center part | 5.0798E-3 | 2 | 16 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microtubule nucleation | 1.2783E-5 | 2 | 23 | 2 | 6292 |
| microtubule cytoskeleton organization | 2.3525E-4 | 2 | 97 | 2 | 6292 |
| microtubule-based process | 3.0847E-4 | 2 | 111 | 2 | 6292 |
| cytoskeleton organization | 1.3422E-3 | 2 | 231 | 2 | 6292 |
| spindle pole body duplication in nuclear envelope | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| spindle pole body duplication | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| spindle pole body organization | 5.3968E-3 | 2 | 17 | 1 | 6292 |
| microtubule organizing center organization | 5.3968E-3 | 2 | 17 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of cytoskeleton | 6.9626E-5 | 2 | 53 | 2 | 6292 |
| structural molecule activity | 2.8947E-3 | 2 | 339 | 2 | 6292 |