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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organellar large ribosomal subunit 4.7233E-7 3 50 3 6292
mitochondrial large ribosomal subunit 4.7233E-7 3 50 3 6292
organellar ribosome 2.8311E-6 3 90 3 6292
mitochondrial ribosome 2.8311E-6 3 90 3 6292
large ribosomal subunit 5.201E-6 3 110 3 6292
mitochondrial matrix 2.1525E-5 3 176 3 6292
mitochondrial lumen 2.1525E-5 3 176 3 6292
ribosomal subunit 2.4213E-5 3 183 3 6292
ribosome 9.6946E-5 3 290 3 6292
mitochondrial part 4.2773E-4 3 475 3 6292
ribonucleoprotein complex 5.4224E-4 3 514 3 6292
organelle lumen 1.1495E-3 3 660 3 6292
intracellular organelle lumen 1.1495E-3 3 660 3 6292
membrane-enclosed lumen 1.3717E-3 3 700 3 6292
non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
intracellular non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
mitochondrion 5.7035E-3 3 1125 3 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.118E-4 3 376 3 6292
cellular protein metabolic process 4.9618E-3 3 1074 3 6292
protein metabolic process 5.8726E-3 3 1136 3 6292
cellular macromolecule biosynthetic process 6.7003E-3 3 1187 3 6292
macromolecule biosynthetic process 6.7343E-3 3 1189 3 6292
gene expression 8.4626E-3 3 1283 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.7729E-5 3 212 3 6292
structural molecule activity 1.5509E-4 3 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle