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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 8.2465E-7 3 60 3 6292
cytosolic ribosome 4.016E-6 3 101 3 6292
large ribosomal subunit 5.201E-6 3 110 3 6292
cytosolic part 7.1149E-6 3 122 3 6292
ribosomal subunit 2.4213E-5 3 183 3 6292
cytosol 9.1032E-5 3 284 3 6292
ribosome 9.6946E-5 3 290 3 6292
ribonucleoprotein complex 5.4224E-4 3 514 3 6292
non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
intracellular non-membrane-bounded organelle 3.5313E-3 3 959 3 6292
preribosome, large subunit precursor 4.2857E-3 3 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 2.118E-4 3 376 3 6292
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 4.768E-4 3 1 1 6292
maturation of LSU-rRNA 4.768E-4 3 1 1 6292
cellular protein metabolic process 4.9618E-3 3 1074 3 6292
protein metabolic process 5.8726E-3 3 1136 3 6292
cellular macromolecule biosynthetic process 6.7003E-3 3 1187 3 6292
macromolecule biosynthetic process 6.7343E-3 3 1189 3 6292
gene expression 8.4626E-3 3 1283 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 3.7729E-5 3 212 3 6292
structural molecule activity 1.5509E-4 3 339 3 6292
rRNA binding 7.6106E-3 3 16 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle