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View Protein Complex Details

Complex Overview

From Publication: Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054
Notes: Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.478939443026]
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

integral to membrane 1.6363E-3 2 255 2 6292
intrinsic to membrane 1.7276E-3 2 262 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sterol metabolic process 4.3504E-5 2 42 2 6292
steroid metabolic process 4.5626E-5 2 43 2 6292
alcohol metabolic process 1.2172E-3 2 220 2 6292
lipid metabolic process 1.4491E-3 2 240 2 6292
mannoprotein biosynthetic process 4.1283E-3 2 13 1 6292
mannoprotein metabolic process 4.1283E-3 2 13 1 6292
cell wall glycoprotein biosynthetic process 4.1283E-3 2 13 1 6292
cell wall mannoprotein biosynthetic process 4.1283E-3 2 13 1 6292
cell wall macromolecule biosynthetic process 6.9813E-3 2 22 1 6292
cellular component macromolecule biosynthetic process 6.9813E-3 2 22 1 6292
cellular cell wall macromolecule metabolic process 7.2981E-3 2 23 1 6292
cell wall macromolecule metabolic process 7.6148E-3 2 24 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

sterol esterase activity 1.5158E-7 2 3 2 6292
carboxylesterase activity 1.1672E-5 2 22 2 6292
hydrolase activity, acting on ester bonds 2.929E-3 2 341 2 6292
lipase activity 6.6645E-3 2 21 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle