From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.490346429348] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
BSP1 |
|
|
|
LAS17 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
actin cortical patch | 4.1432E-5 | 2 | 41 | 2 | 6292 |
cortical actin cytoskeleton | 6.6999E-5 | 2 | 52 | 2 | 6292 |
cortical cytoskeleton | 6.6999E-5 | 2 | 52 | 2 | 6292 |
actin cytoskeleton | 1.8038E-4 | 2 | 85 | 2 | 6292 |
cell cortex part | 2.304E-4 | 2 | 96 | 2 | 6292 |
cell cortex | 2.974E-4 | 2 | 109 | 2 | 6292 |
cytoskeletal part | 1.0156E-3 | 2 | 201 | 2 | 6292 |
cytoskeleton | 1.1732E-3 | 2 | 216 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
actin cortical patch distribution | 3.1786E-4 | 2 | 1 | 1 | 6292 |
actin polymerization or depolymerization | 2.859E-3 | 2 | 9 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
protein binding, bridging | 6.3477E-3 | 2 | 20 | 1 | 6292 |
protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |