| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.556425353704] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| FCY2 |
|
|
|
| FUN26 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleoside transport | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid transport | 2.304E-4 | 2 | 96 | 2 | 6292 |
| purine transport | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| cytidine transport | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| cytosine transport | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| pyrimidine nucleoside transport | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| pyrimidine transport | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| nucleobase transport | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| AMP metabolic process | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| purine ribonucleoside monophosphate metabolic process | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| ribonucleoside monophosphate metabolic process | 7.9314E-3 | 2 | 25 | 1 | 6292 |
| purine nucleoside monophosphate metabolic process | 7.9314E-3 | 2 | 25 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| nucleoside transmembrane transporter activity | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity | 2.2737E-6 | 2 | 10 | 2 | 6292 |
| cytidine transmembrane transporter activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| pyrimidine nucleoside transmembrane transporter activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| substrate-specific transmembrane transporter activity | 1.7943E-3 | 2 | 267 | 2 | 6292 |
| transmembrane transporter activity | 2.3578E-3 | 2 | 306 | 2 | 6292 |
| substrate-specific transporter activity | 2.8436E-3 | 2 | 336 | 2 | 6292 |
| transporter activity | 4.1132E-3 | 2 | 404 | 2 | 6292 |