From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
Notes: | Classifier used Gene Ontology annotations. [FDR: 0.068] [SVM Score: 0.577597314932] |
Complex Size: | 2 proteins |
Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
NOP53 |
|
|
|
NPL3 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nuclear export | 2.6542E-4 | 2 | 103 | 2 | 6292 |
nuclear transport | 4.2367E-4 | 2 | 130 | 2 | 6292 |
nucleocytoplasmic transport | 4.2367E-4 | 2 | 130 | 2 | 6292 |
ribosomal large subunit export from nucleus | 2.859E-3 | 2 | 9 | 1 | 6292 |
processing of 27S pre-rRNA | 5.0798E-3 | 2 | 16 | 1 | 6292 |
intracellular transport | 7.7118E-3 | 2 | 553 | 2 | 6292 |
establishment of ribosome localization | 8.248E-3 | 2 | 26 | 1 | 6292 |
ribosome localization | 8.248E-3 | 2 | 26 | 1 | 6292 |
ribosomal subunit export from nucleus | 8.248E-3 | 2 | 26 | 1 | 6292 |
establishment of localization in cell | 9.0494E-3 | 2 | 599 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
poly-purine tract binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
poly(A) RNA binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
single-stranded RNA binding | 1.5888E-3 | 2 | 5 | 1 | 6292 |
RNA binding | 3.3934E-3 | 2 | 367 | 2 | 6292 |
rRNA binding | 5.0798E-3 | 2 | 16 | 1 | 6292 |