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Protein Overview: CDA1

General Information:
Name(s) found: CDA1 / YLR307W [SGD]
Description(s) found:
Found 23 descriptions.
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  • Chitin deacetylase, together with Cda2p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: chitosan layer of spore wall [ISSLink to PubMed article]
    Biological Process: ascospore wall assembly [IDALink to PubMed article][IMPLink to PubMed article]
    Molecular Function: chitin deacetylase activity [IDALink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFNTIQSV LFAAFFLKQG NCLASNGSTA LMGEVDMQTP FPEWLTEFTN LTQWPGIDPP  60
   61 YIPLDYINLT EVPELDRYYP GQCPKISREQ CSFDCYNCID VDDVTSCFKL SQTFDDGPAP 120
  121 ATEALLKKLR QRTTFFVLGI NTVNYPDIYE HILERGHLIG THTWSHEFLP SLSNEEIVAQ 180
  181 IEWSIWAMNA TGKHFPKYFR PPYGAIDNRV RAIVKQFGLT VVLWDLDTFD WKLITNDDFR 240
  241 TEEEILMDIN TWKGKRKGLI LEHDGARRTV EVAIKINELI GSDQLTIAEC IGDTDYIERY 300
  301 D

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) CDA1 CDA2

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] deduced N/A No confident structure predictions are available.
    2 View Details [107..301] Pfam 60.721246 Polysaccharide deacetylase No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chitin deacetylase activity
    		•  10.7874217761055 bayes_pls_golite062009
  • deacetylase activity
    		•  5.05898534854944 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  2.02667023181984 bayes_pls_golite062009
  • binding
    		•  1.08589216404246 bayes_pls_golite062009
  • hydrolase activity
    		•  1.07980851332544 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.808382884321605 bayes_pls_golite062009
  • protein binding
    		•  0.394432087623352 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle