| General Information: |
|
| Name(s) found: |
MSN5 /
YDR335W
[SGD]
|
| Description(s) found:
Found 27 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 1224 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nucleus
[IDA ]
|
| Biological Process: |
protein export from nucleus
[IDA]
|
| Molecular Function: |
protein binding
[IPI]
importin-alpha export receptor activity [IDA ][ISS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MDSTGASQIV SALDVIYSPK SNNSQRQEAQ KFLDEVKLCS ESPFWGYEIA LQNPTNSILK 60
61 YFGLGLLDHA VKKNWNDYDE GKRVALRKWV MELNFGVQDY DTRYIKEKLA TLWVEVAKRT 120
121 WGEALKQTNP TEEQLLTSWV DMDNNLFELW NINQSSRELA LIIFRILFED VFLLDDLIVL 180
181 KRMTVIQPLC VMIVCPIEVF AIKYKFSDKW TKFKANEEGW FSVWIPELNN ALQQNNSEYI 240
241 IRLLETLKTC LNWPLTEVIV RNDVLSSLLT CLSSNIPRAQ SMALDSIHIL LTRPYSNESH 300
301 YQMTIDRVFD NMDLLDSVYE SLLFDPTDDI DETKYPIIKK FVDMISCLYV CVPKIKETNG 360
361 QIQKYFKLVL KTTYNPSLIV SGLTLDLWCT CLRNDEYLPK LEKYVIPDLL QFAADALVYY 420
421 EQIDGHISKK FAEIDFQSKS EFQTFCSTYR KRIRDIIRLI SCVELDLTYD WLNNRLNNYF 480
481 SSPFGQQVLS STFLDHKLEP YLGALSQYMI VECFINGCIR WKIWYPTGDD YDEKLDSILQ 540
541 KLEILSNQLI ALNLREPLLL KKQIQNFALF LTMLKDNVLF TLLEKIITSA TMDYPEINLE 600
601 ERGAESDAVR DLRYACGIEL NRMALLMPES LKKIYPDLES VIARIMPNLS YHEKISFKSF 660
661 LLIIVLKSSL DMKEERFAAI VDPELLAWSD KTTVVGLSDL HWFMERLGIV QIAEYFQRRD 720
721 IDENSDLLSI PIDDEGKELK SELTKRWQSL FPVRATRMFI HYSMQSIKTD EEFKMLQDLW 780
781 RPRIVPILPY ITRLLYQLQS YHDPDNWKGL PTVVQSFVKY STIERFWEAG ASNKSKDEFI 840
841 DEHMKAMQTL RDFADSVGHI IRYTREYTLL VLSAISSLGS VFYLLDESPD LLLNSIAIFK 900
901 PGSNEISPGV STHGWKHIMN IAIRPILKGC PKDCLGKFMP AFLPKLFEIL DLLLCQKWSS 960
961 HMNDMDMNPV PTDDDQMTEE ILEENLLRQL TTVVVRIVID CVGQGNANPN SAKSRLNNHQ1020
1021 MEMRKIIFND LNTLAPFLKL LNHLISFKDT KCSFNSILVM KCCLTSVLNQ NNTVDEYFTF1080
1081 EVMKNLLLNV LCNSAFKDSF HEALYAFTVI FLTLCKEYPS ARAFLFEISN GYNIDELYRN1140
1141 LRSVDEYKTQ RALMIDFIDW VKSTSGKEDG NVDHAGDERK RQEKREAILK KANERLIKKN1200
1201 KENGDMLDDP NIEDGAVGNL FDDN |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Gavin AC, et al. (2006) |
|
GFA1 MSN5 NUM1 |
| View Details | Ho Y, et al. (2002) |
|
GAL11 MSN5 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Schneider, DA, et al. (2006) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 2 | Uetz P, et al. (2000) | ||
| View Screen | 2 | Uetz P, et al. (2000) | ||
| View Screen | 2 | Uetz P, et al. (2000) | ||
| View Screen | 2 | Uetz P, et al. (2000) |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..253] |  |
3.522879 | Importin beta |
| 2 | View Details | [254..393] | |
2.061985 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [394..481] | |
1.056993 | View MSA. Confident ab initio structure predictions are available. |
| 4 | View Details | [482..647] | |
1.02499 | View MSA. Confident ab initio structure predictions are available. |
| 5 | View Details | [648..1131] | |
2.016877 | View MSA. No confident structure predictions are available. |
| 6 | View Details | [1132..1224] | |
1.003984 | View MSA. No confident structure predictions are available. |
| 7 | View Details | [906..968] | |
N/A | No confident structure predictions are available. |
| 8 | View Details | [969..1147] | |
2.050949 | View MSA. No confident structure predictions are available. |
| 9 | View Details | [1148..1224] | |
1.022983 | View MSA. No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.96 |
Source: Reynolds et al. (2008)