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Protein Overview: ATP16

General Information:
Name(s) found: ATP16 / YDL004W [SGD]
Description(s) found:
Found 32 descriptions.
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  • Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial proton-transporting ATP synthase, central stalk [IMPLink to PubMed article][IPILink to PubMed article][ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: ATP synthesis coupled proton transport [IMPLink to PubMed article][IPILink to PubMed article][ISSLink to PubMed article]
    Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism [IMPLink to PubMed article][IPILink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSIIGKSA SRSLNFVAKR SYAEAAAASS GLKLQFALPH ETLYSGSEVT QVNLPAKSGR  60
   61 IGVLANHVPT VEQLLPGVVE VMEGSNSKKF FISGGFATVQ PDSQLCVTAI EAFPLESFSQ 120
  121 ENIKNLLAEA KKNVSSSDAR EAAEAAIQVE VLENLQSVLK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) ATP16 DCW1 DDR48 FIT1 RAD27 RPP1A YCK2 YMR118C ZEO1
    View Details (MIPS) Mewes HW, et al. (2004) ATP1 ATP14 ATP15 ATP16 ATP17 ATP18 ATP19 ATP2 ATP20 ATP3 ATP4 ATP5 ATP6 ATP7 ATP8 INH1 OLI1 TIM11
    View Details Krogan NJ, et al. (2006) ATP16 CDC60 DHH1 DNF1 GDH3
    View Details Qiu et al. (2008) ATP1 ATP14 ATP15 ATP16 ATP17 ATP18 ATP19 ATP2 ATP20 ATP3 ATP4 ATP5 ATP6 ATP7 ATP8 COB COX1 COX2 COX3 COX4 COX5A COX6 COX7 COX8 COX9 CYT1 INH1 OLI1 QCR10 QCR2 QCR6 QCR7 QCR8 QCR9 RIP1 STF1 STF2

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 113.68867 Epsilon subunit of F1F0-ATP synthase C-terminal domain; Epsilon subunit of F1F0-ATP synthase N-terminal domain
    2 View Details [118..160] PSI-BLAST 113.68867 Epsilon subunit of F1F0-ATP synthase C-terminal domain; Epsilon subunit of F1F0-ATP synthase N-terminal domain


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle