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Protein Overview: YJCC_ECOLI

General Information:
Name(s) found: YJCC_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Hypothetical protein yjcC - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 528 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHRARHQLL ALPGIIFLVL FPIILSLWIA FLWAKSEVNN QLRTFAQLAL DKSELVIRQA  60
   61 DLVSDAAERY QGQVCTPAHQ KRMLNIIRGY LYINELIYAR DNHFLCSSLI APVNGYTIAP 120
  121 ADYKREPNVS IYYYRDTPFF SGYKMTYMQR GNYVAVINPL FWSEVMSDDP TLQWGVYDTV 180
  181 TKTFFSLSKE ASAATFSPLI HLKDLTVQRN GYLYATVYST KRPIAAIVAT SYQRLITHFY 240
  241 NHLIFALPAG ILGSLVLLLL WLRIRQNYLS PKRKLQRALE KHQLCLYYQP IIDIKTEKCI 300
  301 GAEALLRWPG EQGQIMNPAE FIPLAEKEGM IEQITDYVID NVFRDLGDYL ATHADRYVSI 360
  361 NLSASDFHTS RLIARINQKT EQYAVRPQQI KFEVTEHAFL DVDKMTPIIL AFRQAGYEVA 420
  421 IDDFGIGYSN LHNLKSLNVD ILKIDKSFVE TLTTHKTSHL IAEHIIELAH SLGLKTIAEG 480
  481 VETEEQVNWL RKRGVRYCQG WFFAKAMPPQ VFMQWMEQLP ARELTRGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] PSI-BLAST 30.0 Response regulator PleD in complex with c-diGMP
    2 View Details [260..528] PSI-BLAST 75.69897 No description for 2r6oA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.24109190514091 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.24109190514091 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.90779640471921 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.08011362874514 bayes_pls_golite062009
  • binding
    		•  0.284032791221831 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0177856074578452 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle