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Protein Overview: YFGA_ECOLI

General Information:
Name(s) found: YFGA_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • Putative HTH-type transcriptional regulator yfgA - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTEATHDQN EALTTGARLR NAREQLGLSQ QAVAERLCLK VSTVRDIEED KAPADLASTF  60
   61 LRGYIRSYAR LVHIPEEELL PGLEKQAPLR AAKVAPMQSF SLGKRRKKRD GWLMTFTWLV 120
  121 LFVVIGLSGA WWWQDRKAQQ EEITTMADQS SAELSSNSEQ GQSVPLNTST TTDPATTSTP 180
  181 PASVDTTATN TQTPAVTAPA PAVDPQQNAV VSPSQANVDT AATPAPTAAT TPDGAAPLPT 240
  241 DQAGVTTPVA DPNALVMNFT ADCWLEVTDA TGKKLFSGMQ RKDGNLNLTG QAPYKLKIGA 300
  301 PAAVQIQYQG KPVDLSRFIR TNQVARLTLN AEQSPAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 11.0 SinR repressor dimerisation domain; SinR repressor, DNA-binding domain
    2 View Details [112..261] FFAS03 1.01 No description for 2j63A was found.
    3 View Details [262..337] MSA 2.174996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  2.61704321965245 bayes_pls_golite062009
  • DNA binding
    		•  2.5830294896479 bayes_pls_golite062009
  • binding
    		•  2.32539337034365 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.02090839306316 bayes_pls_golite062009
  • transcription factor activity
    		•  1.1817223971636 bayes_pls_golite062009
  • catalytic activity
    		•  0.374904657353081 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle