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Protein Overview: MALT_ECOLI

General Information:
Name(s) found: MALT_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • HTH-type transcriptional regulator malT (ATP-dependent transcriptional activator malT) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 901 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIPSKLSRP VRLDHTVVRE RLLAKLSGAN NFRLALITSP AGYGKTTLIS QWAAGKNDIG  60
   61 WYSLDEGDNQ QERFASYLIA AVQQATNGHC AICETMAQKR QYASLTSLFA QLFIELAEWH 120
  121 SPLYLVIDDY HLITNPVIHE SMRFFIRHQP ENLTLVVLSR NLPQLGIANL RVRDQLLEIG 180
  181 SQQLAFTHQE AKQFFDCRLS SPIEAAESSR ICDDVSGWAT ALQLIALSAR QNTHSAHKSA 240
  241 RRLAGINASH LSDYLVDEVL DNVDLATRHF LLKSAILRSM NDALITRVTG EENGQMRLEE 300
  301 IERQGLFLQR MDDTGEWFCY HPLFGNFLRQ RCQWELAAEL PEIHRAAAES WMAQGFPSEA 360
  361 IHHALAAGDA LMLRDILLNH AWSLFNHSEL SLLEESLKAL PWDSLLENPQ LVLLQAWLMQ 420
  421 SQHRYGEVNT LLARAEHEIK DIREDTMHAE FNALRAQVAI NDGNPDEAER LAKLALEELP 480
  481 PGWFYSRIVA TSVLGEVLHC KGELTRSLAL MQQTEQMARQ HDVWHYALWS LIQQSEILFA 540
  541 QGFLQTAWET QEKAFQLINE QHLEQLPMHE FLVRIRAQLL WAWARLDEAE ASARSGIEVL 600
  601 SSYQPQQQLQ CLAMLIQCSL ARGDLDNARS QLNRLENLLG NGKYHSDWIS NANKVRVIYW 660
  661 QMTGDKAAAA NWLRHTAKPE FANNHFLQGQ WRNIARAQIL LGEFEPAEIV LEELNENARS 720
  721 LRLMSDLNRN LLLLNQLYWQ AGRKSDAQRV LLDALKLANR TGFISHFVIE GEAMAQQLRQ 780
  781 LIQLNTLPEL EQHRAQRILR EINQHHRHKF AHFDENFVER LLNHPEVPEL IRTSPLTQRE 840
  841 WQVLGLIYSG YSNEQIAGEL EVAATTIKTH IRNLYQKLGV AHRQDAVQHA QQLLKMMGYG 900
  901 V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..422] PSI-BLAST 13.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    2 View Details [423..809] PSI-BLAST 16.69897 Transcription factor MalT domain III
    3 View Details [810..901] PSI-BLAST 15.39794 Crystallographic structure of response regulator StyR from Pseudomonas fluorescens

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.38012107359817 bayes_pls_golite062009
  • protein binding
    		•  0.90942498397011 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.802322336220332 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.41617031570549 bayes_pls_golite062009
  • DNA binding
    		•  0.29647638972446 bayes_pls_golite062009
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  4.3783822692838 bayes_pls_golite062009
  • DNA binding
    		•  2.98242537415469 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.90897931927895 bayes_pls_golite062009
  • transcription factor activity
    		•  2.57346479183384 bayes_pls_golite062009
  • binding
    		•  1.861833300221 bayes_pls_golite062009
  • two-component response regulator activity
    		•  1.47327435257738 bayes_pls_golite062009
  • signal transducer activity
    		•  1.437458964114 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.437458964114 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle