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Protein Overview: GNTR_ECOLI

General Information:
Name(s) found: GNTR_ECOLI [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
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  • HTH-type transcriptional regulator gntR (Gluconate utilization system GNT-I transcriptional repressor) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKRPVLQD VADRVGVTKM TVSRFLRNPE QVSVALRGKI AAALDELGYI PNRAPDILSN  60
   61 ATSRAIGVLL PSLTNQVFAE VLRGIESVTD AHGYQTMLAH YGYKPEMEQE RLESMLSWNI 120
  121 DGLILTERTH TPRTLKMIEV AGIPVVELMD SKSPCLDIAV GFDNFEAARQ MTTAIIARGH 180
  181 RHIAYLGARL DERTIIKQKG YEQAMLDAGL VPYSVMVEQS SSYSSGIELI RQARREYPQL 240
  241 DGVFCTNDDL AVGAAFECQR LGLKVPDDMA IAGFHGHDIG QVMEPRLASV LTPRERMGSI 300
  301 GAERLLARIR GESVTPKMLD LGFTLSPGGS I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] PSI-BLAST 94.39794 Crystal structure of a ccpa-crh-dna complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.03730517010624 bayes_pls_golite062009
  • DNA binding
    		•  2.13752511265098 bayes_pls_golite062009
  • transcription factor activity
    		•  2.10452652023643 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.05471649974481 bayes_pls_golite062009
  • binding
    		•  1.58080550382179 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.29966985317584 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.20324889750334 bayes_pls_golite062009
  • signal transducer activity
    		•  0.11302624216037 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.11302624216037 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle