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Protein Overview: CE37018

General Information:
Name(s) found: CE37018 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00009899 locus:efl-3 status:Confirmed UniProt:Q20619 protein_id:CAA91391.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 600 amino acids

    Gene Ontology:
    Cellular Component: transcription factor complex [IEALink to PubMed article]
    Biological Process: DNA repair [IMPLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTIFGSSNA MFLNIEANKE NIPPGTEFKK ESFVLPEPRV NRTTDPDHEN LLPSPVPRPS  60
   61 PAMSQLSDAS FLSQDGGAVN TSADEADDDL EVTSRKEKSL GLLCQRFLIA INEETVGSST 120
  121 REVHLETVAR KMNVEKRRIY DIVNVMEALD AMQKTNKSYY QWQGLESLPK LMFDLQNEAV 180
  181 EEGLPERVLR VEQAMCSFTE LSSPRGKQGF KDIVGSFVSC TSTPTTPSTS FDSVTVKMEP 240
  241 AGLLEKRSRV DTRDRQGRNS LAQLCRRFLM VLLSNPKNIR KVSLDVASTV LIKDPETEGF 300
  301 EPPSRSRCRR LYDIANVLVA LGLIKKVHYL FGTKKIPLFV YCGPEPDQTG SFDVFQSVER 360
  361 LLSSSQNVPQ TPIIKAQTDK IVQQIAGFGK RTLSEQNLTK PSGNTPKIAK IKSAAVRSSP 420
  421 MYMENNLFMF AEVVTAEAAA EKMRYDAFAQ LSRTILGSVA SINSLNAPLT SSQHPMTSRL 480
  481 PPLPMAPLQL PKLPEIPKPQ AQKQFTFPAT SRPRFNFPDY TPVQSTIRPL VSQMTFPQES 540
  541 SQLHNLDVKP KHLMSNILGE SKKFKNNQNT FEHTTSSAFQ VVKKGETRPK KVFGEIQNLQ 600
  601

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] deduced N/A No confident structure predictions are available.
    2 View Details [86..155] PSI-BLAST 23.522879 Cell cycle transcription factor E2F-4
    3 View Details [156..275] PSI-BLAST 13.154902 Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer
    4 View Details [276..346] FFAS03 2.36 Cell cycle transcription factor E2F-4
    5 View Details [347..461] PSI-BLAST 8.154902 Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer
    6 View Details [462..600] MSA 5.105997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.683379929086364 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.16959343932447 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0949481158963694 bayes_pls_golite062009
  • DNA binding
    		•  0.00746597740509714 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle