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Protein Overview: gi|29028862, gi|...

General Information:
Name(s) found: gi|8886954 [NCBI NR]
gi|51969260 [NCBI NR]
gi|29028862 [NCBI NR]
gi|25317943 [NCBI NR]
gi|18394881 [NCBI NR]
gi|110743122 [NCBI NR]
Description(s) found:
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  • gi|8886954|gb|AAF80640.1|AC069251_33 F2D10.6 [Arabidopsis thaliana] [NCBI NR]
  • gi|51969260|dbj|BAD43322.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|29028862|gb|AAO64810.1| At1g20575 [Arabidopsis thaliana] [NCBI NR]
  • pir||H86338 protein F2D10.6 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18394881|ref|NP_564118.1| dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110743122|dbj|BAE99453.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9LM93) F2D10.6 (At1g20575) [athaliana3702.FASTAC.txt]
  • At1g20575 [Arabidopsis thaliana]gi|51969260|dbj|BAD43322.1| hypothetical protein [Arabidopsis thaliana]gi|25317943|pir||H86338 protein F2D10.6 [imported] - Arabidopsis thalianagi|18394881|ref|NP_564118.1| dolichyl-phosphate beta-D-mannosyltransferase, [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dolichyl-phosphate beta-D-mannosyltransferase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative | chr1:7126977-7128667 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • F2D10.6 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g20575 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • dolichyl-phosphate beta-D-mannosyltransferase/ eukaryotic elongation factor-2 kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:7126987-7128677 REVERSE LENGTH=246 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g20575 OS=Arabidopsis thaliana GN=At1g20570 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4HUK8, At1g20575 OS=Arabidopsis thaliana GN=At1g20570 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 246 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [ISS]
    Biological Process: protein amino acid glycosylation [ISS]
    Molecular Function: dolichyl-phosphate beta-D-mannosyltransferase activity [ISS]
    elongation factor-2 kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEMETKGE KKYKYSIIIP TYNERLNIAI IVYLIFKHLR DVDFEIIVVD DGSPDGTQEI  60
   61 VKQLQQLYGE DRILLRARAK KLGLGTAYIH GLKHATGDFV VIMDADLSHH PKYLPSFIKK 120
  121 QLETNASIVT GTRYVKGGGV HGWNLMRKLT SRGANVLAQT LLWPGVSDLT GSFRLYKKSA 180
  181 LEDVISSCVS KGYVFQMEMI VRATRKGYHI EEVPITFVDR VFGTSKLGGS EIVEYLKGLV 240
  241 YLLLTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..246] PSI-BLAST 29.154902 The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • mannosyltransferase activity
    		•  3.87594044828967 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  2.78377598963895 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  2.70047942699289 bayes_pls_golite062009
  • UTP:glucose-1-phosphate uridylyltransferase activity
    		•  2.67542562955569 bayes_pls_golite062009
  • transferase activity
    		•  2.62166586999833 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  2.33861720107822 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.01768771829228 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  2.00651267140641 bayes_pls_golite062009
  • UTP-monosaccharide-1-phosphate uridylyltransferase activity
    		•  1.90086040617591 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
    		•  1.60323537823461 bayes_pls_golite062009
  • alpha-1,2-mannosyltransferase activity
    		•  1.53617752123292 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  1.33788133706753 bayes_pls_golite062009
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  1.10309252319727 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  0.983416157001861 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.897978517422275 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.79629851874184 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.412018910498896 bayes_pls_golite062009
  • glucuronosyltransferase activity
    		•  0.287421645469793 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.2363835251362 bayes_pls_golite062009
  • binding
    		•  0.074398891333042 bayes_pls_golite062009
  • acetylglucosaminyltransferase activity
    		•  0.0562130308868509 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.0539392112504681 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle