YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: JAL29_ARATH

General Information:
Name(s) found: JAL29_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • Nitrile-specifier protein 4 OS=Arabidopsis thaliana GN=NSP4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: glucosinolate catabolic process [IDA]
    nitrile biosynthetic process [IDA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKVEAQGG NGGNQWDDGS EYDAVTKIQV AAGGNGIEYV KFTYVKNGQT EEAPLRGVKG  60
   61 RSFEADPFVI NHPEEHLVSV EGRYNPEGLI LGLTFKSNKK TSDLIGYEDG TPFTLQVQDK 120
  121 KIVGFYGFAG NNLHSLGAYF APLTNVTPLN AKKLEAKGGD TGDIWDDGVY DNVRKVYVGQ 180
  181 AQYGIAFVKF EYVNGSQVVV GDEHGKKTEL GVEEFEIDAD DYIVYVEGYR EKVNGMTSEM 240
  241 ITFLSFKTYK GKTSQPIEQR PGIKFVLQGG KIVGFHGRST DVLDSLGAYI SLSPTPNLHG 300
  301 KWTKVDENGD GPGLRCSHDI AQVGNKIYSF GGEFTPNQPI DKHLYVFDIE SRTWSISPAT 360
  361 GDIPTLSCLG VCMVSIGSTL YVFGGRDASR QYNGFYSFDT TTNEWKLLTP VEEGPTPRSF 420
  421 HSMAADEENV YVFGGVSATA RLNTLDSYNI VDKKWFHCST PGDSLTARGG AGLEVVQGKV 480
  481 WVVYGFNGCE VDDVHYYDPV QDKWTQVETF GVRPSERSVF ASAALGKHIV IFGGEIAMDP 540
  541 LAHVGPGQLT DGTFALDTET LQWERLDKFG GEEETPSSRG WTASTTATIG GKKGLVMHGG 600
  601 KAPTNDRFDD LFFYGIDSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] PSI-BLAST 23.69897 Crystal structure of the Parkia platycephala seed lectin
    2 View Details [143..514] PSI-BLAST 3.221849 Hemopexin
    3 View Details [515..619] PSI-BLAST 65.0 Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.39138979674162 bayes_pls_golite062009
  • catalytic activity
    		•  0.055192735886245 bayes_pls_golite062009
  • hydrolase activity
    		•  0.00353231833192195 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle