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Protein Overview: RH21_ARATH

General Information:
Name(s) found: RH21_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana GN=RH21 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 733 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTINEVVG STSVNTLDSS IAKKPVFLTK KQREELALKR RQDQISEQRV RREQLGRPEP  60
   61 ETEDVSNGDT NRDKDRDRDR DRDRERDRDR ERDRGRDRDR DRDRDRDRDR ERERDRERDR 120
  121 RERDREPDRR NREKEREEEV KAREKARVEK LVEREKEKEL DAIKEQYLGG KKPKKRVIRP 180
  181 SEKFRFSFDW ENTEDTSRDM NVLYQNPHEA QLLFGRGFRA GMDRREQKKQ AAKHEKEMRD 240
  241 EIRKKDGIVE KPEEAAAQRV REEAADTYDS FDMRVDRHWS DKRLEEMTER DWRIFREDFN 300
  301 ISYKGSRIPR PMRSWEESKL TSELLKAVER AGYKKPSPIQ MAAIPLGLQQ RDVIGIAETG 360
  361 SGKTAAFVLP MLAYISRLPP MSEENETEGP YAVVMAPTRE LAQQIEEETV KFAHYLGFRV 420
  421 TSIVGGQSIE EQGLKITQGC EIVIATPGRL IDCLERRYAV LNQCNYVVLD EADRMIDMGF 480
  481 EPQVAGVLDA MPSSNLKPEN EEEELDEKKI YRTTYMFSAT MPPGVERLAR KYLRNPVVVT 540
  541 IGTAGKTTDL ISQHVIMMKE SEKFFRLQKL LDELGEKTAI VFVNTKKNCD SIAKNLDKAG 600
  601 YRVTTLHGGK SQEQREISLE GFRAKRYNVL VATDVVGRGI DIPDVAHVIN YDMPKHIEMY 660
  661 THRIGRTGRA GKSGVATSFL TLHDTEVFYD LKQMLVQSNS AVPPELARHE ASRFKPGTVP 720
  721 DRPPRHSDTV YIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] MSA 5.310995 View MSA. No confident structure predictions are available.
    2 View Details [257..733] PSI-BLAST 106.0 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle