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Protein Overview: gi|11994443, gi|...

General Information:
Name(s) found: gi|15231529 [NCBI NR]
gi|11994443 [NCBI NR]
gi|110738170 [NCBI NR]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • gi|15231529|ref|NP_189255.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994443|dbj|BAB02445.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|110738170|dbj|BAF01016.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 922 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPEAKLILL ILRFNALKSY INSDPEEVMS VISQIISLVK SMVTETETEL MSLISETIDF  60
   61 FKEMDLESQP NSLRKLISLI SRTHFVNSSD WEEPVPESTL MSLIKETWSM KPQPELISLI 120
  121 QKIISLVDNS PELKLKSFIT QLIFLDDNLS ERLNWNYSRR FLSLSRYIIS LATSVDWNLQ 180
  181 PKPESELMSL TNQSISVFNS MDVDSQPEPL RNLISLISLA SFRSSPTNLR YSKPNMVDIL 240
  241 NLFKDKTVEF ETGSLTKRVV WKSLNKKLFL LVTETLSLDP EPKLISLIHR IFSHVLSMNS 300
  301 KWKNLISLCP QVQVILKKGK FHVIEQGLWT RNQKWDDPVS DDDSTEARVV SWRKNKWDCL 360
  361 PFNWDKFMLT EEKDDTHFVC RGCYGENHED NSKAPVEIKH PLHPKHSLQL ALFNDDKTRQ 420
  421 CYCCHELLRD DTASMFYFCS PCDFGLKFTC AKKSPVLSID QPKWHEHTLA LFPSQDPQTC 480
  481 SLCALKHSNL VFYICPPCDF IIHQSCFSLP HVIRISRHLH CISFTHSFRK GDWICGVCRR 540
  541 KINNDYGGYH CIKKGCLYAV HSKCATQPNV WDGIEREGES EEEVEELEPF LTISDGIIQH 600
  601 FSHEHHHLTL DENNGKDYDE NKLCQACIMP IYFGNSYSCL QCDFILHEEC ANLSRRLHHP 660
  661 IHPHLLTLIS DNPLRDVGSW NNSDRDYCSA CPSLCISGFF YKCSKIDCDF RLHVQCATIS 720
  721 EPLLHPSHMH HLFLTSKPNE ERNCSVCAKA PGEYTKETFN CIEEECDYAL CFKCATLPQQ 780
  781 VRYKHDKHIL PLSYGKKTSD MTYWCEACEG KINPEEGFYR CDEYCCVHLH ITCLLGKDLY 840
  841 LKPRSSWSLS CGALLILPNY LWMSRPICSS CGNRCPQRIF LFLLSGASFF CSVYCIPTTR 900
  901 ELGFFPGLEA GELALILSSF RS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] PSI-BLAST 4.39794 Solution structure of the Kruppel-associated box (KRAB) domain
    2 View Details [145..303] MSA 1.531997 View MSA. No confident structure predictions are available.
    3 View Details [304..475] FFAS03 1.06 No description for 2jm1A was found.
    4 View Details [476..660] PSI-BLAST 13.522879 Transcription factor IIIA, TFIIIA
    5 View Details [661..750] PSI-BLAST 47.0 No description for 2i13A was found.
    6 View Details [751..922] FFAS03 1.97 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.414217765611205 bayes_pls_golite062009
    5 No functions predicted.
    6
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle