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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11994443, gi|...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPEAKLILL ILRFNALKSY INSDPEEVMS VISQIISLVK SMVTETETEL MSLISETIDF  60
   61 FKEMDLESQP NSLRKLISLI SRTHFVNSSD WEEPVPESTL MSLIKETWSM KPQPELISLI 120
  121 QKIISLVDNS PELKLKSFIT QLIFLDDNLS ERLNWNYSRR FLSLSRYIIS LATSVDWNLQ 180
  181 PKPESELMSL TNQSISVFNS MDVDSQPEPL RNLISLISLA SFRSSPTNLR YSKPNMVDIL 240
  241 NLFKDKTVEF ETGSLTKRVV WKSLNKKLFL LVTETLSLDP EPKLISLIHR IFSHVLSMNS 300
  301 KWKNLISLCP QVQVILKKGK FHVIEQGLWT RNQKWDDPVS DDDSTEARVV SWRKNKWDCL 360
  361 PFNWDKFMLT EEKDDTHFVC RGCYGENHED NSKAPVEIKH PLHPKHSLQL ALFNDDKTRQ 420
  421 CYCCHELLRD DTASMFYFCS PCDFGLKFTC AKKSPVLSID QPKWHEHTLA LFPSQDPQTC 480
  481 SLCALKHSNL VFYICPPCDF IIHQSCFSLP HVIRISRHLH CISFTHSFRK GDWICGVCRR 540
  541 KINNDYGGYH CIKKGCLYAV HSKCATQPNV WDGIEREGES EEEVEELEPF LTISDGIIQH 600
  601 FSHEHHHLTL DENNGKDYDE NKLCQACIMP IYFGNSYSCL QCDFILHEEC ANLSRRLHHP 660
  661 IHPHLLTLIS DNPLRDVGSW NNSDRDYCSA CPSLCISGFF YKCSKIDCDF RLHVQCATIS 720
  721 EPLLHPSHMH HLFLTSKPNE ERNCSVCAKA PGEYTKETFN CIEEECDYAL CFKCATLPQQ 780
  781 VRYKHDKHIL PLSYGKKTSD MTYWCEACEG KINPEEGFYR CDEYCCVHLH ITCLLGKDLY 840
  841 LKPRSSWSLS CGALLILPNY LWMSRPICSS CGNRCPQRIF LFLLSGASFF CSVYCIPTTR 900
  901 ELGFFPGLEA GELALILSSF RS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle