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Protein Overview: SYP23_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..255] PSI-BLAST 24.221849 Syntaxin 1A N-terminal domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • phosphatidic acid binding
  • 5.99692791841048 bayes_pls_golite062009
  • SNAP receptor activity
  • 3.50393203740159 bayes_pls_golite062009
  • calcium channel inhibitor activity
  • 2.5370773879611 bayes_pls_golite062009
  • binding
  • 2.13344290488739 bayes_pls_golite062009
  • myosin head/neck binding
  • 1.76421579737303 bayes_pls_golite062009
  • transporter activity
  • 1.74189664015129 bayes_pls_golite062009
  • protein binding
  • 1.51700626946713 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 1.49085442233849 bayes_pls_golite062009
  • transmembrane transporter activity
  • 1.13101548288086 bayes_pls_golite062009
  • protein transporter activity
  • 1.0920578675702 bayes_pls_golite062009
  • extracellular ligand-gated ion channel activity
  • 0.86350507004267 bayes_pls_golite062009
  • excitatory extracellular ligand-gated ion channel activity
  • 0.86350507004267 bayes_pls_golite062009
  • SNARE binding
  • 0.71459772253941 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.643064875848901 bayes_pls_golite062009
  • gated channel activity
  • 0.621670335227137 bayes_pls_golite062009
  • ligand-gated channel activity
  • 0.41937155561589 bayes_pls_golite062009
  • ligand-gated ion channel activity
  • 0.41937155561589 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.370484918396857 bayes_pls_golite062009
  • arachidonic acid binding
  • 0.187597126289389 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 0.0647076360772156 bayes_pls_golite062009
  • channel activity
  • 0.0647076360772156 bayes_pls_golite062009
  • substrate-specific channel activity
  • 0.0435980899803177 bayes_pls_golite062009
  • phospholipid binding
  • 0.0172309833091902 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle