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Protein Overview: NRPB3_ARATH

General Information:
Name(s) found: NRPB3_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana GN=NRPB3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 319 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    DNA-directed RNA polymerase IV complex [IPI]
    DNA-directed RNA polymerase V complex [IPI]
    nucleolus [IDA]
    DNA-directed RNA polymerase II, core complex [IPI]
    Biological Process: transcription [IEA][ISS]
    Molecular Function: DNA binding [IEA][ISS]
    DNA-directed RNA polymerase activity [IEA][ISS]
    protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGATYQRFP KIKIRELKDD YAKFELRETD VSMANALRRV MISEVPTVAI DLVEIEVNSS  60
   61 VLNDEFIAHR LGLIPLTSER AMSMRFSRDC DACDGDGQCE FCSVEFRLSS KCVTDQTLDV 120
  121 TSRDLYSADP TVTPVDFTID SSVSDSSEHK GIIIVKLRRG QELKLRAIAR KGIGKDHAKW 180
  181 SPAATVTFMY EPDIIINEDM MDTLSDEEKI DLIESSPTKV FGMDPVTRQV VVVDPEAYTY 240
  241 DEEVIKKAEA MGKPGLIEIS PKDDSFIFTV ESTGAVKASQ LVLNAIDLLK QKLDAVRLSD 300
  301 DTVEADDQFG ELGAHMRGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..319] PSI-BLAST 61.69897 RPB3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle