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Protein Overview: CSN8_ARATH

General Information:
Name(s) found: CSN8_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana GN=CSN8 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 197 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    signalosome [IPI][TAS]
    Biological Process: photomorphogenesis [TAS]
    response to jasmonic acid stimulus [IMP]
    protein deneddylation [TAS]
    signalosome assembly [IMP]
    response to light stimulus [IMP]
    cullin deneddylation [IMP]
    Molecular Function: protein binding [IPI]
    metalloendopeptidase activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSPVKEAL AAKSFDKIAD ICDTLMLQVA SEGIEYHDDW PYAIHLLGYF YVDDCDSARF  60
   61 LWKRIPTAIK ERKPEVVAAW GIGQKLWTHD YAGVYEAIRG YDWSQEAKDM VAAFSDLYTK 120
  121 RMFQLLLSAY STITIHDLAL FLGMTEDDAT TYVVENGWTV DAASQMASVK KQAVKREQKV 180
  181 DSSKLQRLTE YVFHLEH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] PSI-BLAST 27.045757 Crystal Structure of Human eIF3k

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.1896012443261 bayes_pls_golite062009
  • binding
    		•  2.15024109065235 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.10453342985083 bayes_pls_golite062009
  • DNA binding
    		•  2.09269818546884 bayes_pls_golite062009
  • transcription factor activity
    		•  1.30414036385056 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.17338630996898 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle