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Protein Overview: asfl-1

General Information:
Name(s) found: asfl-1 / CE36095 [WormBase]
Description(s) found:
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  • WBGene00007277 locus:asfl-1 Probable histone chaperone asf-1-like protein status:Partially_confirmed UniProt:Q17603 protein_id:CAA99762.3 [WormBase]
  • gi|74962297|sp|Q17603.4|ASF1L_CAEEL RecName: Full=Probable histone chaperone asf-1-like protein; AltName: Full=Anti-silencing function protein 1-like [NCBI NR]
  • gi|71980526|ref|NP_492567.3| ASF-Like family member (asfl-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|38422267|emb|CAA99762.3| C. elegans protein C03D6.5, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Probable histone chaperone asf-1-like protein OS=Caenorhabditis elegans GN=asfl-1 PE=3 SV=4 [Swiss-Prot]
  • [wormpep115.fasta]
  • Hypothetical protein C03D6.5 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36095 WBGene00007277 anti-silencing protein status:Confirmed TR:Q17603 protein_id:CAA99762.3 [wormpep150.fasta]
  • 36095 WBGene00007277 anti-silencing protein status:Confirmed TR:Q17603 protein_id:CAA99762.3 [wormpep130-phg-ecoli-orf-rand.fasta]
  • anti-silencing protein status:Confirmed TN:CAA99762 protein_id:CAA99762.3 [wormpep115.fasta.reversed]
  • CE36095 WBGene00007277 locus:asfl-1 anti-silencing protein status:Confirmed UniProt:Q17603 protein_id:CAA99762.3 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36095 WBGene00007277 locus:asfl-1 anti-silencing protein status:Confirmed UniProt:Q17603 protein_id:CAA99762.3| [wormORF-contam.fasta]
  • C03D6.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36095 WBGene00007277 locus:asfl-1 anti-silencing protein status:Confirmed SW:Q17603 protein_id:CAA99762.3 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36095 WBGene00007277 locus:asfl-1 anti-silencing protein status:Partially_confirmed UniProt:Q17603 protein_id:CAA99762.3 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE36095 WBGene00007277 locus:asfl-1 status:Partially_confirmed UniProt:Q17603 protein_id:CAA99762.3 Probable histone chaperone asf-1-like protein [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: chromatin assembly or disassembly [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRVNIVQV QILDNPAMFV DKFKMEITFE VFEHLPHDLE WELVYVGSGT SRDFDQVLDS  60
   61 ALVGPIPEGR HKFVFDAEHP DISKIPVEDI VGVSVLLLRC KYNDQEFINM GWFVANEYTD 120
  121 EELKENPPAK PLIEKLSRKI ETEDLRVTTF PIRWTDEDPV AEPVDEEANK VFDEDDLMPL 180
  181 HDDGQDDDEE EEDDDETGPN TEEVDLNESF NERMANAHDG TEQKNGEESM EHDGASGDVE 240
  241 MGDKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] PSI-BLAST 75.39794 NMR structure of human histone chaperone, ASF1A
    2 View Details [173..245] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.999539169709238 bayes_pls_golite062009
  • protein binding
    		•  0.502291897822877 bayes_pls_golite062009
  • histone binding
    		•  0.0789723067466195 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle