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View Structure Prediction Details

Protein: asfl-1
Organism: Caenorhabditis elegans
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for asfl-1.

Description E-value Query
Range
Subject
Range
unc-85 - status:Confirmed UniProt:Q19326 protein_id:AAA81128.2
290.0 [0..1] [244..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRVNIVQV QILDNPAMFV DKFKMEITFE VFEHLPHDLE WELVYVGSGT SRDFDQVLDS  60
   61 ALVGPIPEGR HKFVFDAEHP DISKIPVEDI VGVSVLLLRC KYNDQEFINM GWFVANEYTD 120
  121 EELKENPPAK PLIEKLSRKI ETEDLRVTTF PIRWTDEDPV AEPVDEEANK VF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.39794
Match: 1teyA
Description: NMR structure of human histone chaperone, ASF1A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.999539169709238 bayes_pls_golite062009
protein binding 0.502291897822877 bayes_pls_golite062009
histone binding 0.0789723067466195 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [173-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEDDLMPLHD DGQDDDEEEE DDDETGPNTE EVDLNESFNE RMANAHDGTE QKNGEESMEH  60
   61 DGASGDVEMG DKH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle