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Protein Overview: lin-1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..171] PSI-BLAST 43.221849 ETS-1 transcription factor, residues 331-440
2 View Details [172..333] FFAS03 1.05 No description for 2j63A was found.
3 View Details [334..441] MSA 5.167996 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • transcription regulator activity
  • 2.20862608643434 bayes_pls_golite062009
  • binding
  • 2.18911933843505 bayes_pls_golite062009
  • DNA binding
  • 1.78415975685994 bayes_pls_golite062009
  • nucleic acid binding
  • 1.64150017312029 bayes_pls_golite062009
  • transcription factor activity
  • 1.30418360837022 bayes_pls_golite062009
  • transcription repressor activity
  • 0.55739080981393 bayes_pls_golite062009
  • transcription activator activity
  • 0.14130464856269 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.13573040816325 bayes_pls_golite062009
  • protein binding
  • 0.035220363090062 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle