General Information: |
|
Name(s) found: |
smg-5 /
CE25134
[WormBase]
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Description(s) found:
Found 20 descriptions. SHOW ALL |
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Organism: | Caenorhabditis elegans |
Length: | 549 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA]
cytoplasm [IDA] |
Biological Process: |
embryonic genitalia morphogenesis
[IMP]
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [IGI] RNA interference [IMP] |
Molecular Function: |
protein binding
[IPI]
DEAD/H-box RNA helicase binding [IPI] ribonuclease activity [ISS] protein phosphatase type 2A regulator activity [NAS] protein phosphatase 2A binding [IPI] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MQKSDEVTEK FKRYCNQLEK YGQTENVHSP VMAMLRRKGR KQLIEIMKRD GDCTSSINKL 60 61 WIVGYYHPFQ FFIRDKEKNM AIAVLLTMFC GELQEMLSLP DDKYPALWNM YIGDFHRYMP 120 121 DEEIQKCLAV GYYSRAIDLD PNQGRAFHVL AGLRADLNVA QKLRLMILGQ LADAPYKKGT 180 181 ELLEYLKFPQ KESTDKLMVD FVIWALNEKS KRMDYQMTGI KIVNEFKAEI EQKLEFDWSL 240 241 IMSTCRLASK LAMKKFGFQQ FYNCFDTIST LYITIYSRTI SSKCLLAEAI SWISDSAEIL 300 301 GHLDEQKNEP HFQKLSVFAK TKWNELNDLV MNHINSVFTS MSLTINPSIS MTSFLLNGPI 360 361 SEPNVEFLSQ LINYLVSVEF PPMEIIHDRE ESGPLLRRIN QSEQKRLDIQ IKTQNDEVNR 420 421 EDWRPVYVLM DYDVIVDKIR IALKIWDIDD FICILPSTVL DELDYQKTKN RAVRPVIRAL 480 481 MELQAEGKIV LKKCDNERSC AEQLVQSARR SAEDHKHIVA FLCKNPSEQK EMEGVTFYDI 540 541 DQFYMKYLE |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..190] | N/A | No confident structure predictions are available. | |
2 | View Details | [191..361] | N/A | No confident structure predictions are available. | |
3 | View Details | [362..549] | 1.15 | No description for 2hwyA was found. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.97 |
Source: Reynolds et al. (2008)