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Protein Overview: CE06462

General Information:
Name(s) found: CE06462 [WormBase]
Description(s) found:
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  • WBGene00011835 Yeast hyptothetical protein YFC5 like status:Partially_confirmed UniProt:Q22561 protein_id:CAA98541.1 [WormBase]
  • pir||T24977 hypothetical protein T19B10.8 - Caenorhabditis elegans [NCBI NR]
  • gi|3879917|emb|CAA98541.1| C. elegans protein T19B10.8, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17564402|ref|NP_505855.1| hypothetical protein T19B10.8 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE06462 WBGene00011835 Yeast hyptothetical protein YFC5 like status:Partially_confirmed TR:Q22561 protein_id:CAA98541.1 [wormpep150.fasta]
  • 06462 WBGene00011835 Yeast hyptothetical protein YFC5 like status:Partially_confirmed TR:Q22561 protein_id:CAA98541.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • negative vesicle formation like (5L723) [Caenorhabditis elegans]gi|3879917|emb|CAA98541.1| Hypothetical protein T19B10.8 [Caenorhabditis elegans]gi|7507947|pir||T24977 hypothetical protein T19B10.8 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • Yeast hyptothetical protein YFC5 like status:Partially_confirmed TR:Q22561 protein_id:CAA98541.1 [wormpep115.fasta.reversed]
  • CE06462 Yeast hyptothetical protein YFC5 like status:Partially_confirmed TR:Q22561 protein_id:CAA98541.1 [wormpep80.hongbin]
  • CE06462 WBGene00011835 Yeast hyptothetical protein YFC5 like status:Partially_confirmed UniProt:Q22561_CAEEL protein_id:CAA98541.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06462 WBGene00011835 Yeast hyptothetical protein YFC5 like status:Partially_confirmed UniProt:Q22561_CAEEL protein_id:CAA98541.1| [wormORF-contam.fasta]
  • Hypothetical protein T19B10.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T19B10.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE06462 WBGene00011835 Yeast hyptothetical protein YFC5 like status:Partially_confirmed UniProt:Q22561 protein_id:CAA98541.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 733 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGKAEIRR QRENCVIFAG ITYGIIFTLV AVVLGFGVYL HTLVHQENSC SMTYMYRKLE  60
   61 FLEIPLLTPQ SDKYSFSVYN EGHRWWNRST IEAGQIPVLF IPGSQGSGKQ IRSLASVMQN 120
  121 KTEMRYAPFS FRFFAVDFDE EMTFMNGHIV KRQIEYVMKA IRKIQSMMRG NRKIVLVGHS 180
  181 YGGMIALLTT IYPEYQKDVE LIIVKGAPLN KQPLVNDWFS LRFNLLLVNQ WNALQNNNLS 240
  241 HVGVVAYSGG IRDYMIPDEW SILRNVRAVI MKVTIKFSAQ VTNRPLWAID GVSDLGADHL 300
  301 AILWCNEFVR HVSRVLWSYA ENLDTLTGRQ VVQKFYKEDV DRNIKRAKLV RHVNDVPSKE 360
  361 IKIGEKYRGF RVNETQFALL IKPKRFEVLS VRVNASCVNS MTTVRYDESM MYFKNSSDGA 420
  421 VETWIYRALE KEEVRLVLDV TAPCSIDIQM SPPMTVQLWR FYEIVFSHLH EVGGTMIVIS 480
  481 VFFAILVRET LFYSTTAVLL TNLVALFFVI HGSTDYTDTT TLPMALGYFM ALGWRAICFV 540
  541 VDWLIVSRIG FVKTGHLALR DDKLMNGLYL VGSAITIMAR NEGSIVLIIL LAYRHHPRAV 600
  601 LLILPTLIPY ILKLVGFPWF STDSLIVYQL QYQPAFYAGG LYLFGLVSNL GNRQITLRLL 660
  661 VYGLVPAFLY LITSPLELFS GFTLIIFSTA RFVTFPSRKS VTPPVPEQER VQVEQPRPIQ 720
  721 NNRQRYNLRN RRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..383] PSI-BLAST 30.0 Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain
    2 View Details [384..515] deduced N/A No confident structure predictions are available.
    3 View Details [516..733] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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