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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE06462
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGKAEIRR QRENCVIFAG ITYGIIFTLV AVVLGFGVYL HTLVHQENSC SMTYMYRKLE  60
   61 FLEIPLLTPQ SDKYSFSVYN EGHRWWNRST IEAGQIPVLF IPGSQGSGKQ IRSLASVMQN 120
  121 KTEMRYAPFS FRFFAVDFDE EMTFMNGHIV KRQIEYVMKA IRKIQSMMRG NRKIVLVGHS 180
  181 YGGMIALLTT IYPEYQKDVE LIIVKGAPLN KQPLVNDWFS LRFNLLLVNQ WNALQNNNLS 240
  241 HVGVVAYSGG IRDYMIPDEW SILRNVRAVI MKVTIKFSAQ VTNRPLWAID GVSDLGADHL 300
  301 AILWCNEFVR HVSRVLWSYA ENLDTLTGRQ VVQKFYKEDV DRNIKRAKLV RHVNDVPSKE 360
  361 IKIGEKYRGF RVNETQFALL IKPKRFEVLS VRVNASCVNS MTTVRYDESM MYFKNSSDGA 420
  421 VETWIYRALE KEEVRLVLDV TAPCSIDIQM SPPMTVQLWR FYEIVFSHLH EVGGTMIVIS 480
  481 VFFAILVRET LFYSTTAVLL TNLVALFFVI HGSTDYTDTT TLPMALGYFM ALGWRAICFV 540
  541 VDWLIVSRIG FVKTGHLALR DDKLMNGLYL VGSAITIMAR NEGSIVLIIL LAYRHHPRAV 600
  601 LLILPTLIPY ILKLVGFPWF STDSLIVYQL QYQPAFYAGG LYLFGLVSNL GNRQITLRLL 660
  661 VYGLVPAFLY LITSPLELFS GFTLIIFSTA RFVTFPSRKS VTPPVPEQER VQVEQPRPIQ 720
  721 NNRQRYNLRN RRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle