YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE05491

General Information:
Name(s) found: CE05491 [WormBase]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • WBGene00008283 status:Partially_confirmed UniProt:Q18809 protein_id:CAA94225.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 615 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNLKYDDYF TPLVDGTRLC KILIGSGDNK TVCGHPIKKQ KKSSTSGILY HLRANHPDTL  60
   61 LEIGGSLEVQ PLKKRKLGEE WRIPENKSGT EGDFINWTAE DFEEKRINDA LINMICLDAM 120
  121 PLSTLERPGI QHFLNEVCPT FVPKGKNQMN VMVHSLHFKY EQRLREELRN VEYVGLGCYS 180
  181 WNKDDRKNEQ VVGISCHFMN SDGSIVTRFL DAIHISDPHE DPELEIENAI KSITDYYSIG 240
  241 NKVVAMIKDG VSNLKLSAQL LEFDIYDCTW NSLSLASISG INTIPGGTEL IEKCKKIVQK 300
  301 INESAVYETS LIGEYMTIDS ADLVKSGKLN WITVVSMFEQ FTKLKGLLDT FLMNDMEGLM 360
  361 LYQQDYDLME IILRTLSPLK TAVDFGKQHT FRISAIISLI SALISKYSAE HSYDMCKAIK 420
  421 LTLEEELKRY LQIPTLLFAT VIDPRVKLLL LPATAKEIVQ KKLEKIAQNI RNAEDVKDVA 480
  481 ITHNQHCKTD VQSNYDLFAE LFKKLHGENY QNSCKEGEIV SPQAMAKTEL ERWISEPNIA 540
  541 FEEPIVFWQK AENRTRYPLL FQLSSIVLCL PGALLNTENL TSAKNLLFEH QIGCEDQTNQ 600
  601 KILFLHQNMK LIGIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] PSI-BLAST 3.69897 No description for 2djrA was found.
    2 View Details [78..615] PSI-BLAST 47.221849 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nuclease activity
    		•  1.53859747390286 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.564102633040245 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.54809175349764 bayes_pls_golite062009
  • hydrolase activity
    		•  0.402789197743512 bayes_pls_golite062009
  • catalytic activity
    		•  0.351839891620214 bayes_pls_golite062009
  • exonuclease activity
    		•  0.35005983270085 bayes_pls_golite062009
  • binding
    		•  0.00138309659308411 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle