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Protein Overview: CE03952

General Information:
Name(s) found: CE03952 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00015533 dehydrogenase status:Predicted UniProt:Q17725 protein_id:CCD63339.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 154 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fatty acid biosynthetic process [IEALink to PubMed article]
    Molecular Function: 3-oxoacyl-[acyl-carrier-protein] reductase activity [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRFSGKDA IITGSSFEIG RATALLFAKE GEKSVIEMTQ KIHPHLAKTH GEIFNVSSIV  60
   61 ALKFGSGRGP YYPLAKAALD QYIRSAAIDL ISEGIRVNTV NPGVVATGFM EVATGLSSEQ 120
  121 SQTFYDNVGS NPSAIPCGYS GRPEQIAKAI AFLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] PSI-BLAST 40.154902 Crystal Structure of Short-Chain Dehydrogenase/Reductase of unknown Function from Caenorhabditis Elegans with Cofactor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle