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Protein Overview: otu1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..112] FFAS03 1.25 Bud emergence mediator Bemp1
2 View Details [113..255] PSI-BLAST 18.522879 Structure of Otubain-2
3 View Details [256..329] FFAS03 1.3 Solution Structure of a Human C2H2-type Zinc Finger Protein

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 2.21864685713998 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 1.24290839691082 bayes_pls_golite062009
  • protein kinase activity
  • 1.16090501968072 bayes_pls_golite062009
  • kinase activity
  • 1.13491087747775 bayes_pls_golite062009
  • protein serine/threonine kinase activity
  • 1.02766102100178 bayes_pls_golite062009
  • protein binding
  • 0.989073783870014 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.931601886287953 bayes_pls_golite062009
  • transferase activity
  • 0.533092562154647 bayes_pls_golite062009
  • hydrolase activity
  • 0.383621648094138 bayes_pls_golite062009
  • catalytic activity
  • 0.202719107986908 bayes_pls_golite062009
    2
    Term Confidence Notes
  • cysteine-type peptidase activity
  • 6.54685807643041 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 6.39247995905454 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 5.91394445088241 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 4.1832081096766 bayes_pls_golite062009
  • peptidase activity
  • 3.28868056127375 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 3.01472402774099 bayes_pls_golite062009
  • thiolester hydrolase activity
  • 2.96735553959103 bayes_pls_golite062009
  • SUMO-specific protease activity
  • 2.65263825059319 bayes_pls_golite062009
  • hydrolase activity
  • 2.29464693834116 bayes_pls_golite062009
  • endopeptidase activity
  • 2.26699762664334 bayes_pls_golite062009
  • transcription regulator activity
  • 2.13534310479552 bayes_pls_golite062009
  • cysteine-type endopeptidase activity
  • 1.95802900199539 bayes_pls_golite062009
  • DNA binding
  • 1.95013248594294 bayes_pls_golite062009
  • binding
  • 1.92046698500094 bayes_pls_golite062009
  • nucleic acid binding
  • 1.74961503597682 bayes_pls_golite062009
  • transcription factor activity
  • 1.20242512567523 bayes_pls_golite062009
  • catalytic activity
  • 1.05972260874031 bayes_pls_golite062009
  • protein binding
  • 0.874003454509364 bayes_pls_golite062009
  • NEDD8-specific protease activity
  • 0.687958315289315 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.467924587720185 bayes_pls_golite062009
  • calcium-dependent cysteine-type endopeptidase activity
  • 0.196538841514154 bayes_pls_golite062009
  • transferase activity
  • 0.0852393573521809 bayes_pls_golite062009
    3
    Term Confidence Notes
  • transcription regulator activity
  • 4.47951889934838 bayes_pls_golite062009
  • DNA binding
  • 4.31051339571017 bayes_pls_golite062009
  • nucleic acid binding
  • 4.04689255235626 bayes_pls_golite062009
  • transcription factor activity
  • 3.28758716579796 bayes_pls_golite062009
  • binding
  • 2.99742524370422 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.05542379535543 bayes_pls_golite062009
  • transcription activator activity
  • 1.97757778483124 bayes_pls_golite062009
  • transcription repressor activity
  • 1.44763794968807 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.26862497534835 bayes_pls_golite062009
  • transcription factor binding
  • 1.23738346570539 bayes_pls_golite062009
  • chromatin binding
  • 1.10179307236186 bayes_pls_golite062009
  • protein binding
  • 0.952480850696098 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.776754909146767 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.627794176881836 bayes_pls_golite062009
  • catalytic activity
  • 0.263007611601737 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle