| Protein: | otu1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 329 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for otu1.
| Description | E-value | Query Range |
Subject Range |
|
|
312.0 | [0..5] | [328..48] |
|
|
310.0 | [0..5] | [328..48] |
|
|
310.0 | [0..5] | [328..48] |
|
|
308.0 | [0..5] | [328..3] |
|
|
307.0 | [0..5] | [328..45] |
|
|
306.0 | [0..5] | [328..3] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSSLRLRLKY ENQSAVETVE ANATVGSFLD LVAAKFSLPR NSIALKFGFP PQDIPLVNSD 60
61 VPLSTLVSSG QQILVLKNAA TSFSTNEPAK PPIPNAATKP TFPPQTEISN PP
|
| Detection Method: |  |
| Confidence: | 1.25 |
| Match: | 1ip9A |
| Description: | Bud emergence mediator Bemp1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.21864685713998 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.24290839691082 | bayes_pls_golite062009 |
| protein kinase activity | 1.16090501968072 | bayes_pls_golite062009 |
| kinase activity | 1.13491087747775 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 1.02766102100178 | bayes_pls_golite062009 |
| protein binding | 0.989073783870014 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.931601886287953 | bayes_pls_golite062009 |
| transferase activity | 0.533092562154647 | bayes_pls_golite062009 |
| hydrolase activity | 0.383621648094138 | bayes_pls_golite062009 |
| catalytic activity | 0.202719107986908 | bayes_pls_golite062009 |
|
Region A: Residues: [113-255] |
1 11 21 31 41 51
| | | | | |
1 AVSHQSKNTS QDPPYVSTPI GDIALRVMPD DNSCLFRALS KPLGFSPYEL REIVANQVLS 60
61 NPDIYSTAIL GKPSIEYASW IRKETSWGGY IELSILSSHF GVEICSVDVK TGRVDSYNPQ 120
121 PATGQRTYIV YSGIHYDLAA LAA
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1tffA |
| Description: | Structure of Otubain-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cysteine-type peptidase activity | 6.54685807643041 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 6.39247995905454 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 5.91394445088241 | bayes_pls_golite062009 |
| ubiquitin thiolesterase activity | 4.1832081096766 | bayes_pls_golite062009 |
| peptidase activity | 3.28868056127375 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.01472402774099 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 2.96735553959103 | bayes_pls_golite062009 |
| SUMO-specific protease activity | 2.65263825059319 | bayes_pls_golite062009 |
| hydrolase activity | 2.29464693834116 | bayes_pls_golite062009 |
| endopeptidase activity | 2.26699762664334 | bayes_pls_golite062009 |
| transcription regulator activity | 2.13534310479552 | bayes_pls_golite062009 |
| cysteine-type endopeptidase activity | 1.95802900199539 | bayes_pls_golite062009 |
| DNA binding | 1.95013248594294 | bayes_pls_golite062009 |
| binding | 1.92046698500094 | bayes_pls_golite062009 |
| nucleic acid binding | 1.74961503597682 | bayes_pls_golite062009 |
| transcription factor activity | 1.20242512567523 | bayes_pls_golite062009 |
| catalytic activity | 1.05972260874031 | bayes_pls_golite062009 |
| protein binding | 0.874003454509364 | bayes_pls_golite062009 |
| NEDD8-specific protease activity | 0.687958315289315 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.467924587720185 | bayes_pls_golite062009 |
| calcium-dependent cysteine-type endopeptidase activity | 0.196538841514154 | bayes_pls_golite062009 |
| transferase activity | 0.0852393573521809 | bayes_pls_golite062009 |
|
Region A: Residues: [256-329] |
1 11 21 31 41 51
| | | | | |
1 VLWDTDVDVV LFDASDVTIT PYVQQLASLL KNMHYYTDTA SFSIRCTICG TGLVGEKDAT 60
61 AHALATGHTQ FGEY
|
| Detection Method: | |
| Confidence: | 1.3 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.47951889934838 | bayes_pls_golite062009 |
| DNA binding | 4.31051339571017 | bayes_pls_golite062009 |
| nucleic acid binding | 4.04689255235626 | bayes_pls_golite062009 |
| transcription factor activity | 3.28758716579796 | bayes_pls_golite062009 |
| binding | 2.99742524370422 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.05542379535543 | bayes_pls_golite062009 |
| transcription activator activity | 1.97757778483124 | bayes_pls_golite062009 |
| transcription repressor activity | 1.44763794968807 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.26862497534835 | bayes_pls_golite062009 |
| transcription factor binding | 1.23738346570539 | bayes_pls_golite062009 |
| chromatin binding | 1.10179307236186 | bayes_pls_golite062009 |
| protein binding | 0.952480850696098 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 0.776754909146767 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.627794176881836 | bayes_pls_golite062009 |
| catalytic activity | 0.263007611601737 | bayes_pls_golite062009 |
