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Protein Overview: Ets97D-PA

General Information:
Name(s) found: Ets97D-PA / FBpp0084458 [FlyBase]
Description(s) found:
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  • gi|94400586|gb|ABF17915.1| FI01018p [Drosophila melanogaster] [NCBI NR]
  • gi|7301516|gb|AAF56638.1| Ets at 97D [Drosophila melanogaster] [NCBI NR]
  • gi|24650435|ref|NP_524523.2| Ets at 97D [Drosophila melanogaster] [NCBI NR]
  • gi|160359048|sp|Q04688.2|ELG_DROME RecName: Full=DNA-binding protein Ets97D; Short=D-elg [NCBI NR]
  • DNA-binding protein Ets97D OS=Drosophila melanogaster GN=Ets97D PE=1 SV=2 [Swiss-Prot]
  • The gene Ets at 97D is referred to in FlyBase by the symbol Dmel\Ets97D (CG6338, FBgn0004510). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:22736497..22738608. It has the cytological map location 97D7. Based on sequence similarity, it is predicted to have molecular function</span>: DNA binding. There is experimental evidence that it is involved in the biological process</span>: pole plasm oskar mRNA localization. 12 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: anatomical structure; organism; tagma; abdominal segment; female germline cyst; egg; organ system; follicle cell; organism subdivision; abdominal segment 7; cell part. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6338-PA translation from_gene[CG6338 Ets97D FBgn0004510] seq_release:3 mol_weight=52645 cds_boundaries:(3R:22,726,202..22,727,847[-]) aa_length:464 transcript_info:[CG6338-RA seq_release:3] gene_info:[gene symbol:Ets97D FBgn0004510 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (AE003758) Ets97D gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG6338-PA [Drosophila melanogaster]gi|24650435|ref|NP_524523.2| CG6338-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(22736834..22737264,22737326..22738040,22738096..22738165,22738227..22738341,22738419..22738482); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB [fly-100309-contam.fasta]
  • Ets at 97D CG6338-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG6338-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • FI01018p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(22736834..22737264,22737326..22738040,22738096..22738165,22738227..22738341,22738419..22738482); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB_protein:AAF56638.1,REFSEQ:NP_524523,GB_protein:AAF56638; MD5=13934c5ca6dcec349121f5848bcfdf62; length=464; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(22736834..22737264,22737326..22738040,22738096..22738165,22738227..22738341,22738419..22738482); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB_protein:AAF56638.1,REFSEQ:NP_524523,GB_protein:AAF56638; MD5=13934c5ca6dcec349121f5848bcfdf62; length=464; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3R:complement(22736834..22737264,22737326..22738040,22738096..22738165,22738227..22738341,22738419..22738482); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB_protein:AAF56638.1,REFSEQ:NP_524523,GB_protein:AAF56638,FlyMine:FBpp0084458,modMine:FBpp0084458; MD5=13934c5ca6dcec349121f5848bcfdf62; length=464; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(26912697..26912760,26912505..26912619,26912374..26912443,26911604..26912318,26911112..26911542)); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB_protein:AAF56638.1,REFSEQ:NP_524523,GB_protein:AAF56638,FlyMine:FBpp0084458,modMine:FBpp0084458; MD5=13934c5ca6dcec349121f5848bcfdf62; length=464; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(26912697..26912760,26912505..26912619,26912374..26912443,26911604..26912318,26911112..26911542)); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB_protein:AAF56638.1,REFSEQ:NP_524523,GB_protein:AAF56638,FlyMine:FBpp0084458,modMine:FBpp0084458; MD5=13934c5ca6dcec349121f5848bcfdf62; length=464; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0084458 type=protein; loc=3R:complement(join(26912697..26912760,26912505..26912619,26912374..26912443,26911604..26912318,26911112..26911542)); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB_protein:AAF56638.1,REFSEQ:NP_524523,GB_protein:AAF56638,FlyMine:FBpp0084458,modMine:FBpp0084458; MD5=13934c5ca6dcec349121f5848bcfdf62; length=464; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(26912697..26912760,26912505..26912619,26912374..26912443,26911604..26912318,26911112..26911542)); ID=FBpp0084458; name=Ets97D-PA; parent=FBgn0004510,FBtr0085088; dbxref=FlyBase:FBpp0084458,FlyBase_Annotation_IDs:CG6338-PA,GB_protein:AAF56638.1,REFSEQ:NP_524523,GB_protein:AAF56638,UniProt/Swiss-Prot:Q04688,FlyMine:FBpp0084458,modMine:FBpp0084458; MD5=13934c5ca6dcec349121f5848bcfdf62; length=464; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS][NAS]
    Biological Process: pole plasm oskar mRNA localization [IMP]
    regulation of transcription, DNA-dependent [IEA]
    regulation of transcription from RNA polymerase II promoter [ISS]
    Molecular Function: DNA binding [ISS][NAS]
    transcription factor activity [IEA]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSNDLSDE LIRRLSVGGA LEEVIASEMF EDSIDVETEA EPDDIIIVHM DIREPLSMLK  60
   61 SLVEQKIGVC LNYYTFWLQD AQELESHKNL VDQCVKGEGL VQINVQIQTI RKRINIADVL 120
  121 KPTEAALAAL AEEVVGQLSP PETASQKSSS SESPIKTPLK RMHKEDSEEE SVEGKDVKPV 180
  181 LNWVLDSKFK REQIRLKIPE AANEWTHAHV TYWLEWAVKQ FELVGINMSD WQMNGQELCA 240
  241 MTHEEFNQKL PRDPGNIFWT HLQLLKECNF VSVVHKRAEE QRKPKQPRIM SANSISTNSG 300
  301 GSLSLEQRIM RKSYQSVKSS DSVESTTSSM NPSNYTTIGS GNNGQVQLWQ FLLEILTDCE 360
  361 HTDVIEWVGT EGEFKLTDPD RVARLWGEKK NKPAMNYEKL SRALRYYYDG DMISKVSGKR 420
  421 FAYKFDCDLK LLIGYDANEL STLVSEGKTA PERVAATETI TEDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] FFAS03 1.04 Solution structure of N-terminal ubiquitin-like domain of human NEDD8 ultimate buster-1
    2 View Details [141..273] PSI-BLAST 27.045757 No description for 2jv3A was found.
    3 View Details [274..464] PSI-BLAST 43.69897 ETS-1 transcription factor, residues 331-440

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.78014377544701 bayes_pls_golite062009
  • binding
    		•  2.70872150536621 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.23822335492051 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.02209816078273 bayes_pls_golite062009
  • DNA binding
    		•  1.8833926783115 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.624731467637361 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • transcription regulator activity
    		•  5.55329976718261 bayes_pls_golite062009
  • DNA binding
    		•  5.08959163553491 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.99681957904233 bayes_pls_golite062009
  • transcription factor activity
    		•  4.33152142980289 bayes_pls_golite062009
  • transcription repressor activity
    		•  3.85678231380989 bayes_pls_golite062009
  • transcription activator activity
    		•  3.70589483230587 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  3.58179858678904 bayes_pls_golite062009
  • binding
    		•  3.52874320222492 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.60738445921725 bayes_pls_golite062009
  • protein binding
    		•  1.80415286835431 bayes_pls_golite062009
  • specific transcriptional repressor activity
    		•  0.96257232341735 bayes_pls_golite062009
  • transcription factor binding
    		•  0.85714789329232 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.66743181561551 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.322180400748724 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity, enhancer binding
    		•  0.23177057841536 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle